rmarkdown: Dynamic Documents for R

Convert R Markdown documents into a variety of formats.

Version: 2.16
Depends: R (≥ 3.0)
Imports: bslib (≥ 0.2.5.1), evaluate (≥ 0.13), htmltools (≥ 0.5.1), jquerylib, jsonlite, knitr (≥ 1.22), methods, stringr (≥ 1.2.0), tinytex (≥ 0.31), tools, utils, xfun (≥ 0.30), yaml (≥ 2.1.19)
Suggests: digest, dygraphs, fs, rsconnect, downlit (≥ 0.4.0), katex (≥ 1.4.0), sass (≥ 0.4.0), shiny (≥ 1.6.0), testthat (≥ 3.0.3), tibble, tufte, vctrs, withr (≥ 2.4.2)
Published: 2022-08-24
Author: JJ Allaire [aut], Yihui Xie ORCID iD [aut, cre], Jonathan McPherson [aut], Javier Luraschi [aut], Kevin Ushey [aut], Aron Atkins [aut], Hadley Wickham [aut], Joe Cheng [aut], Winston Chang [aut], Richard Iannone ORCID iD [aut], Andrew Dunning ORCID iD [ctb], Atsushi Yasumoto ORCID iD [ctb, cph] (Number sections Lua filter), Barret Schloerke [ctb], Carson Sievert ORCID iD [ctb], Christophe Dervieux [ctb], Devon Ryan ORCID iD [ctb], Frederik Aust ORCID iD [ctb], Jeff Allen [ctb], JooYoung Seo ORCID iD [ctb], Malcolm Barrett [ctb], Rob Hyndman [ctb], Romain Lesur [ctb], Roy Storey [ctb], Ruben Arslan [ctb], Sergio Oller [ctb], RStudio, PBC [cph], jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in inst/rmd/h/jqueryui-AUTHORS.txt), Mark Otto [ctb] (Bootstrap library), Jacob Thornton [ctb] (Bootstrap library), Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Alexander Farkas [ctb, cph] (html5shiv library), Scott Jehl [ctb, cph] (Respond.js library), Ivan Sagalaev [ctb, cph] (highlight.js library), Greg Franko [ctb, cph] (tocify library), John MacFarlane [ctb, cph] (Pandoc templates), Google, Inc. [ctb, cph] (ioslides library), Dave Raggett [ctb] (slidy library), W3C [cph] (slidy library), Dave Gandy [ctb, cph] (Font-Awesome), Ben Sperry [ctb] (Ionicons), Drifty [cph] (Ionicons), Aidan Lister [ctb, cph] (jQuery StickyTabs), Benct Philip Jonsson [ctb, cph] (pagebreak Lua filter), Albert Krewinkel [ctb, cph] (pagebreak Lua filter)
Maintainer: Yihui Xie <xie at yihui.name>
BugReports: https://github.com/rstudio/rmarkdown/issues
License: GPL-3
URL: https://github.com/rstudio/rmarkdown, https://pkgs.rstudio.com/rmarkdown/
NeedsCompilation: no
SystemRequirements: pandoc (>= 1.14) - http://pandoc.org
Citation: rmarkdown citation info
Materials: README NEWS
In views: ReproducibleResearch
CRAN checks: rmarkdown results

Documentation:

Reference manual: rmarkdown.pdf
Vignettes: Lua filters in R Markdown
Learn R Markdown

Downloads:

Package source: rmarkdown_2.16.tar.gz
Windows binaries: r-devel: rmarkdown_2.16.zip, r-release: rmarkdown_2.16.zip, r-oldrel: rmarkdown_2.16.zip
macOS binaries: r-release (arm64): rmarkdown_2.16.tgz, r-oldrel (arm64): rmarkdown_2.16.tgz, r-release (x86_64): rmarkdown_2.16.tgz, r-oldrel (x86_64): rmarkdown_2.16.tgz
Old sources: rmarkdown archive

Reverse dependencies:

Reverse depends: adea, basecallQC, BDP2, BoneProfileR, CellNOptR, D4TAlink.light, DeMixT, FAMetA, frequency, netresponse, qra, RcmdrPlugin.UCA, RPA, sangeranalyseR, tufterhandout
Reverse imports: abseqR, actel, activAnalyzer, addinslist, addinsOutline, agricolaeplotr, alevinQC, AlpsNMR, altdoc, amanida, AMARETTO, amplican, ANOVAIREVA, ANOVAShiny, ANOVAShiny2, AnVILPublish, apa, apisensr, archetyper, ari, attachment, autoharp, autonewsmd, aweSOM, BatchQC, bdclean, BETS, binb, bioclim, biocompute, BiocStyle, BiocWorkflowTools, biodosetools, BioImageDbs, BioNetStat, blandr, blastula, BLCOP, blogdown, BLRShiny, BLRShiny2, bnem, bookdown, boot.heterogeneity, BrailleR, brinton, bsplus, bumblebee, CALANGO, canprot, CARNIVAL, caRpools, CCWeights, CEMiTool, ChAMP, chicane, chimeraviz, ChIPexoQual, chronicle, cleanrmd, clinDataReview, CLUSTShiny, CMShiny, Cogito, compareGroups, COMPASS, condformat, conflr, convergEU, corporaexplorer, corto, countsimQC, cppcheckR, CTShiny, CTShiny2, data.validator, DataExplorer, dataMaid, dataReporter, DCEtool, DEP, DescrTab2, DiscoRhythm, distill, dlookr, dmdScheme, DQAstats, DriveML, easyreporting, ecocomDP, effectR, ELMER, emayili, EML, encryptedRmd, enrichTF, EpiCompare, EpiSignalDetection, epitweetr, esATAC, eseis, explore, ezpickr, FactoInvestigate, fastqcr, fidelius, Fiscore, FishPhyloMaker, flair, flexdashboard, flexsiteboard, flextable, flipbookr, flowAI, flowPloidy, flying, FlyingR, formattable, freesurferformats, ftExtra, GapAnalysis, gCrisprTools, GeneTonic, genogeographer, ggPMX, gistr, gitdown, Gmisc, GOFShiny, govdown, grapesAgri1, gretlR, grwat, GWASinspector, HHG, hoardeR, hrbrthemes, hypeR, i2dash, ideal, ifCNVR, igate, iheiddown, ImmuneSpaceR, inlmisc, INSPECTumours, interpretCI, IntLIM, IsoCor, jds.rmd, kableExtra, kfa, knitrBootstrap, KNNShiny, KnowSeq, komaletter, latrend, learnr, levi, lfmm, LifeInsuranceContracts, liftr, lingglosses, linl, listdown, litteR, MACSQuantifyR, mailmerge, MatrixQCvis, MBECS, MBQN, mcboost, mdapack, MDSPCAShiny, memoiR, memor, MendelianRandomization, meshr, metabolic, MetaIntegrator, metaseqR2, microbiomeExplorer, minidown, mitch, MNLR, monographaR, MQmetrics, multiSight, NACHO, NBShiny, NBShiny2, NBShiny3, ncappc, NDP, ngsReports, NMproject, OddsPlotty, officedown, OmicInt, omicplotR, OMICsPCA, openintro, openPrimeRui, ORION, orloca, oRus, OSLdecomposition, osmose, ottrpal, pagedown, palmid, papaja, parsermd, pathfindR, pcaExplorer, personr, PFIM, pguIMP, phonfieldwork, pinp, PINstimation, pipeFrame, pkgdown, pkgnet, polished, POMA, postcards, posterdown, PreKnitPostHTMLRender, PREPShiny, prereg, prettydoc, PROBShiny, processR, prodigenr, protGear, PTXQC, qbld, qgshiny, quarto, radiant.data, randomForestExplainer, rapbase, RawHummus, RCAS, rchallenge, rcompendium, rddtools, rdtLite, rebook, refdb, regionReport, Relectoral, renderthis, repana, RepoGenerator, reportfactory, reprex, resumer, revealjs, RInno, rmake, rmdfiltr, rmdformats, rmdplugr, rmdshower, rmzqc, Rpadrino, RPyGeo, rrtable, rtemps, rticles, rtiddlywiki, rUM, SAMtool, SBGNview, SBGNview.data, scmeth, scTensor, scTGIF, seminr, SeqSQC, shattering, SHELF, shinyepico, shinyHeatmaply, shinytest2, singleCellTK, siteymlgen, SmartEDA, smog, SNPannotator, spathial, starticles, STAT, STAT2, statcheck, stationery, Statsomat, statsr, statVisual, stevemisc, stevetemplates, strandCheckR, svSweave, swirlify, SWTools, TestGardener, thaipdf, tidyCDISC, timevis, tint, TPP, trackdown, truthiness, tscR, tufte, ubiquity, uiucthemes, upstartr, vidger, vitae, VTShiny, wallace, webexercises, worcs, workflowr, wpa, xaringan, ymlthis
Reverse suggests: a4Classif, a4Core, a4Preproc, a4Reporting, ABACUS, abbyyR, ABC.RAP, abess, ABHgenotypeR, abstr, abstractr, academictwitteR, accelerometry, accessibility, accessrmd, accrualPlot, ACDC, ACE, ace2fastq, acnr, act, ActFrag, activatr, ActiveDriverWGS, ActivePathways, activityCounts, ActivityIndex, actuaryr, ADAM, adaptDiag, AdaptGauss, adaptiveGPCA, adaptMT, adaptr, AdaSampling, add2ggplot, additive, addScales, adductData, adductomicsR, adegraphics, adepro, adept, adespatial, adfExplorer, AdhereR, AdhereRViz, ADImpute, adjclust, adjustedCurves, admiral, admiraldev, admiralonco, admix, admixr, admmDensestSubmatrix, ADMMsigma, ADMUR, adnuts, adobeanalyticsr, adoptr, ADPclust, adpss, AdvancedBasketballStats, adventr, AeRobiology, AeroSampleR, afdx, afex, affinity, AffiXcan, affycoretools, afpt, AFR, ag5Tools, aggregateBioVar, AGHmatrix, aglm, agridat, agriwater, AgroR, agvgd, AHEnsDbs, AHLRBaseDbs, AHM, AHMeSHDbs, ahMLE, ahnr, AHPathbankDbs, ahptopsis2n, AHPubMedDbs, AHWikipathwaysDbs, AIPW, aire.zmvm, airGR, airGRdatassim, airGRiwrm, airGRteaching, AirMonitor, airpart, airportr, airqualityES, airr, airt, ajv, akc, akmedoids, alakazam, ALDEx2, aldvmm, alfr, alfred, algo, algorithmia, alkahest, allcontributors, AllelicImbalance, allestimates, allhomes, Allspice, alluvial, almanac, alookr, alpaca, AlphaBeta, alphabetr, AlphaPart, AlphaSimR, altair, amanpg, amapGeocode, amapro, AMAPVox, ambit, AMCTestmakeR, Amelia, amelie, amen, amerifluxr, AMOUNTAIN, amp, AmpGram, ampir, AMPLE, AMR, amt, analysisPipelines, analyzer, Anaquin, AnchorRegression, ANCOMBC, Andromeda, andurinha, ANF, AnglerCreelSurveySimulation, anim.plots, animalcules, animint2, animl, anipaths, anndata, AnnoProbe, annotater, AnnotationBustR, AnnotationFilter, AnnotationHub, AnnotationHubData, annotatr, anomalize, ANOVAreplication, anovir, anscombiser, antaresEditObject, antaresProcessing, antaresRead, antaresViz, AnthropMMD, anticlust, antitrust, ANTs, AnVIL, AnVILBilling, anyLib, ao, aoos, aopdata, aorsf, AOV1R, apache.sedona, APAlyzer, APAtree, apcf, APCtools, apeglm, apex, apexcharter, aphid, aphylo, APIS, APL, apollo, applicable, apsimx, apyramid, AquaBPsim, AQuadtree, ArchaeoChron, ArchaeoPhases, archeofrag, archetypal, arcpullr, arctools, areal, arena2r, arenar, argoFloats, argonR, argparse, ARIbrain, arkdb, arkhe, armspp, ARPobservation, arrangements, arrow, arsenal, artMS, ARTofR, ARTool, aRxiv, asciicast, asciiSetupReader, ascotraceR, ashr, ASICS, ASICSdata, aspi, aspline, aSPU, assemblerr, assertable, assertr, AssessORF, AssessORFData, AssetAllocation, ASSIGN, assignPOP, assignR, ASSISTant, ast2ast, asteRisk, ASURAT, asymmetry, asymptor, async, atable, ATACseqQC, ATbounds, atena, ATNr, atpolR, atsd, atSNP, attempt, attention, attrib, AUCell, auctestr, auctionr, audiometry, auditor, augmentedRCBD, auk, ausplotsR, AustralianPoliticians, auth0, autocart, AutoDeskR, autoFC, autoimage, autoMrP, autonomics, autoRasch, autoReg, AutoScore, autostats, autostsm, autothresholdr, autoTS, avar, AvInertia, aVirtualTwins, avocado, aweek, aws.alexa, aws.ecx, awst, AzureAuth, AzureCognitive, AzureContainers, AzureCosmosR, AzureGraph, AzureKeyVault, AzureKusto, azuremlsdk, AzureQstor, AzureRMR, AzureStor, AzureTableStor, AzureVision, AzureVM, BaalChIP, babelgene, babette, babsim.hospital, babynamesIL, BacArena, backbone, backpipe, backShift, bacon, bacondecomp, baffle, baggr, baguette, bain, Ball, BALLI, bama, bambu, bamlss, bamp, bamsignals, BANDITS, bandle, bang, bannerCommenter, banocc, BANOVA, baRcodeR, barcodetrackR, BARIS, barplot3d, BART, bartcs, baRulho, BAS, base.rms, base64url, baseballDBR, baseballr, basedosdados, BaseSet, BASiCS, basictabler, basilisk, basilisk.utils, BASiNET, BASiNETEntropy, basket, batata, batchelor, BatchGetSymbols, batchmix, batchtma, batchtools, bate, BAwiR, bayes4psy, bayesAB, bayesassurance, bayesbr, BayesCombo, bayesCT, bayesdfa, bayesDP, BayesESS, bayesforecast, BayesGOF, bayesian, BayesianFROC, BayesianMediationA, BayesianNetwork, BayesianPower, BayesianReasoning, BayesianTools, bayesImageS, bayeslm, BayesLN, bayesm, BayesMallows, BayesMassBal, bayesmeta, bayesmove, BayesMRA, bayesnec, bayesplay, bayesplot, bayesPO, BayesPostEst, Bayesrel, bayesrules, BayesSampling, BayesSpace, BayesSurvival, bayestestR, BayesTools, bayfoxr, baymedr, bayNorm, baytrends, bbknnR, bbotk, bbreg, bbricks, bbw, bcaboot, BCDAG, bcdata, BCEA, Bchron, bcmaps, bcpa, bcROCsurface, bdc, BDgraph, bdl, bdlp, BDMMAcorrect, bdots, bdpar, bdrc, bdscale, beachmat, beadplexr, BeadSorted.Saliva.EPIC, beakr, beanz, BEARscc, beastier, beautier, BEclear, BED, bedr, BeeGUTS, beer, beezdemand, behaviorchange, belg, benchdamic, benchmarkfdrData2019, benchmarkme, benthos, berryFunctions, besthr, bestNormalize, BESTree, bestridge, BetaPASS, betaSandwich, BeviMed, BFF, BFpack, bfw, BgeeCall, BgeeDB, BGGM, bggum, BGVAR, bhmbasket, BHMSMAfMRI, BHSBVAR, bib2df, biblio, bibliometrix, biblionetwork, BiCausality, biClassify, biclustermd, BICORN, BiDimRegression, BIEN, bife, BiFET, bifurcatingr, BIGDAWG, bigDM, BIGL, biglasso, bigleaf, bigMap, bignum, bigPint, bigQF, bigQueryR, bigstep, BigVAR, billboarder, BinaryDosage, binaryMM, binaryTimeSeries, BindingSiteFinder, binfunest, binman, BinMat, binomialRF, binovisualfields, BINtools, bio3d, bioacoustics, bioassayR, bioassays, biobroom, biobtreeR, bioC.logs, bioCancer, BiocCheck, BiocDockerManager, BiocFileCache, BiocIO, BioCircos, BiocManager, BiocNeighbors, BiocOncoTK, BioCor, BiocPkgTools, BiocSet, BiocSingular, BiocSklearn, biocthis, biodb, biodbChebi, biodbExpasy, biodbHmdb, biodbKegg, biodbLipidmaps, biodbMirbase, biodbNcbi, biodbNci, biodbUniprot, biogrowth, Bioi, bioimagetools, bioinactivation, biokNN, biomaRt, biomartr, BIOMASS, biomformat, BioNERO, bioOED, Biopeak, BioPlex, BioQC, bioRad, BioRssay, biosensors.usc, bioseq, biosigner, Biostatistics, biosurvey, biotic, BioTIP, biotmle, biotools, BioVenn, bipartiteD3, bipd, BiplotML, biscale, biscuiteer, biscuiteerData, BisqueRNA, bistablehistory, bit, bitmexr, BivRec, biwavelet, bizdays, blacksheepr, blaise, blapsr, blink, bliss, blockCV, blocklength, BloodCancerMultiOmics2017, BloodGen3Module, blorr, BLPestimatoR, blscrapeR, bluebike, bluster, bmass, bmggum, bmlm, bmotif, BMRBr, BMRSr, bmscstan, bmstdr, bnbc, bnclassify, bndovb, bnma, bnmonitor, BNPdensity, bnpsd, BNrich, bnspatial, BOBaFIT, bodenmiller, bodymapRat, BOJ, BoltzMM, bonsai, boomer, bootf2, bootGOF, bootPLS, bootUR, borealis, borrowr, BOSO, BoSSA, BOSSreg, boundingbox, box, boxr, bp, bpa, bpbounds, bpnreg, bpp, BPRMeth, bRacatus, brainflowprobes, brainKCCA, BrainSABER, BranchGLM, BRDT, breakaway, breakDown, breakfast, breathtestcore, breathteststan, brendaDb, BRETIGEA, brgedata, BRGenomics, brglm2, BridgeDbR, bridgedist, bridgesampling, brisk, briskaR, brm, brms, brmsmargins, brokenstick, brolgar, broom, broom.helpers, broom.mixed, brotli, BrowserViz, brunnermunzel, bs4cards, bs4Dash, BSBT, bSims, bslib, BSPBSS, bsseq, bssm, bsub, BSW, BTYD, BTYDplus, BubbleTree, bubblyr, buffeRs, bugsigdbr, buildmer, buildr, bulkAnalyseR, bulletcp, bumbl, BumpyMatrix, bunching, bunchr, bundle, burnr, busdater, BUSpaRse, butcher, bvartools, bwsTools, bytescircle, c2c, c3, C50, CAEN, caesar, CAGEfightR, cageminer, CAGEr, CAISEr, calculus, calendar, calidad, calm, calpassapi, campfin, campsis, campsismod, camsRad, caMST, camtrapR, canadamaps, cancensus, canceR, CancerGram, CancerInSilico, CancerSubtypes, candisc, Canek, cansim, canvasXpress, cape, capitalR, capl, captr, caracas, caRamel, carbonate, card, Cardinal, CardinalWorkflows, caRecall, careless, caret, caretEnsemble, CARlasso, caROC, carpenter, cartograflow, cartography, casabourse, cascadess, cascsim, casebase, casino, CASMAP, cassandRa, cassowaryr, CAST, cat.dt, cat2cat, catalog, CATALYST, CatastRo, categoryCompare, catenary, catmaply, cats, catsim, cattonum, causact, CausalGPS, CausalImpact, CausalMBSTS, causaloptim, causalOT, CausalQueries, CB2, cbaf, CBDA, CBEA, cBioPortalData, cbioportalR, cbpManager, cbsodataR, CCAMLRGIS, ccfindR, ccmap, ccmEstimator, ccoptimalmatch, ccostr, ccpsyc, ccRemover, cdata, CDatanet, cder, cdfquantreg, cdparcoord, CEDA, celaref, celarefData, celda, CellaRepertorium, CellBarcode, cellbaseR, CellBench, celldex, CelliD, cellity, cellmigRation, CellMixS, cellpypes, cellranger, cellscape, celltrackR, CellTrails, cellxgenedp, CENFA, censcyt, censored, Census2016, censusapi, censusr, censusxy, CEOdata, Cepo, ceRNAnetsim, ceRtainty, Certara.R, ceser, cesR, cetcolor, CeTF, CexoR, CFAcoop, cfbfastR, cfda, cfDNAPro, cffr, CGGP, cgmquantify, CGNM, CGPfunctions, ChainLadder, chameleon, ChAMP, chandwich, changepoints, ChangePointTaylor, chantrics, charlatan, checkdown, checkmate, checkpoint, checkr, cheem, cheese, chemCal, ChemmineOB, ChemmineR, chemmodlab, chemodiv, ChemoSpec, ChemoSpec2D, chess, chessR, chest, CHETAH, Chicago, childesr, chilemapas, chillR, chipenrich, chipenrich.data, ChIPexoQualExample, chipPCR, ChIPpeakAnno, ChIPseeker, chipseqDBData, chirps, chk, chkptstanr, chlorpromazineR, CHNOSZ, CHOIRBM, cholera, CholWishart, chromatographR, chromhmmData, chromoMap, ChromSCape, chromswitch, chromVAR, chronicler, chronochrt, CHRONOS, chronosphere, chunkhooks, chyper, CIARA, ciccr, cicero, CIDER, CIEE, cifti, ciftiTools, CIMICE, cimir, cinaR, CINmetrics, CINNA, cinterpolate, CIPerm, cir, circacompare, circle, circlize, circRNAprofiler, circularEV, CircularSilhouette, circumplex, cIRT, citationchaser, CiteFuse, cito, ciTools, ciuupi2, civis, CJAMP, cjbart, Ckmeans.1d.dp, CKMRpop, clam, clarifai, ClassifyR, classInt, cleaner, cleanNLP, cleanTS, cleanUpdTSeq, cleaver, clhs, cli, ClickHouseHTTP, clifford, clifro, climaemet, climatrends, ClimInd, ClimMobTools, ClimProjDiags, climwin, clinicalsignificance, clinmon, clinspacy, clintools, clinUtils, clipp, clipr, cliProfiler, cliqueMS, CliquePercolation, CLLmethylation, clmplus, clock, clonotypeR, cloudos, clubSandwich, CluMP, CluMSID, ClussCluster, clustAnalytics, ClustAssess, clustcurv, Cluster.OBeu, clusteredinterference, clusterExperiment, clusterhap, ClusterJudge, clustermole, clustermq, clusternomics, clusterPower, clusterProfiler, ClusterR, ClusterSignificance, ClustGeo, clustifyr, clustifyrdatahub, ClustImpute, ClusTorus, clustra, clustree, ClustVarLV, clustvarsel, CLVTools, cmapR, cmcR, cmdfun, cmfrec, cmhc, cmocean, cmprskcoxmsm, cmpsR, cmR, cms, cmstatr, cmtest, CNAIM, cnbdistr, CNEr, cNORM, CNVfilteR, CNVgears, CNViz, CNVMetrics, CNVRanger, CNVScope, coala, cobalt, coca, COCOA, cocorresp, coda.base, coda4microbiome, codacore, codalm, codebook, codemeta, codemetar, coder, codified, CoDiNA, codyn, coefplot, cofad, coffee, CoFRA, CoGAPS, cogena, cogeqc, cognitoR, cohortBuilder, CohortPlat, cohorttools, coil, Coinprofile, COINr, cointmonitoR, cointReg, cola, colf, collapse, CollapseLevels, collateral, collatz, collin, coloc, colocr, colorblindcheck, colorBlindness, colorDF, colordistance, colorednoise, colorhcplot, colorist, colorpatch, colorspace, colorSpec, colourpicker, colourvision, colt, comapr, comat, combi, combinedevents, combiroc, coMethDMR, CommKern, common, commonsMath, communication, comorbidity, Compack, compareMCMCs, comparer, compartmap, compcodeR, comperank, comperes, compicc, completejourney, ComplexHeatmap, complexity, complexNet, ComplexUpset, compositions, composits, CompoundDb, ComPrAn, comprehenr, comsimitv, comtradr, concatipede, conclus, concstats, concurve, CondCopulas, condGEE, condiments, condir, CondiS, condTruncMVN, condusco, condvis2, conf, CONFESS, config, configr, confintr, conformalbayes, ConformalSmallest, confoundr, ConfusionTableR, CongreveLamsdell2016, CoNI, conjurer, conleyreg, connectapi, ConnectednessApproach, connectwidgets, conos, conquestr, ConR, consensus, consensusDE, consensusOV, consensusSeekeR, consort, ConsReg, CONSTANd, constellation, conStruct, contact, contactdata, container, contentid, conText, contingency, ContourFunctions, contrast, contribution, contsurvplot, contTimeCausal, conumee, convdistr, convexjlr, convey, CoopGame, CoordinateCleaner, CopernicusDEM, cops, copula, copulaSim, CopyNeutralIMA, CopyNumberPlots, copyseparator, coRanking, corazon, Corbi, coRdon, coreCT, CoRegNet, CoreGx, corHMM, CorMID, corncob, CornerstoneR, cornet, coro, coronavirus, CoRpower, corpus, corpustools, corr2D, corral, corrcoverage, CorrectOverloadedPeaks, correlation, correlationfunnel, corrgram, corrgrapher, corrplot, corrr, cort, cosa, coseq, cosinor2, CoSMoS, cosmosR, COTAN, countcolors, countdata, countdown, countfitteR, coveffectsplot, covid19.analytics, covid19br, covid19brazil, covid19dbcand, covid19italy, covid19sf, covid19swiss, covidcast, covidprobability, covidsymptom, covr, CovRegRF, covRNA, covsim, cowbell, cowplot, cowsay, coxed, coxphw, coxrt, CPBayes, cPCG, cpi, cpp11, cppRouting, cpr, cPseudoMaRg, cpsurvsim, cpsvote, cqcr, CRABS, cragg, crandep, cranly, credentials, creditmodel, cregg, cRegulome, crestr, CRF, crfsuite, cricketdata, crimedata, crisprBase, crisprBowtie, crisprBwa, crisprScore, crisprScoreData, crisprseekplus, CrispRVariants, criticalpath, critpath, crochet, CropDetectR, cropgrowdays, crossmeta, crossnma, crossrun, crosstable, crosstalkr, CrossVA, crosswalkr, crplyr, crqa, crso, crsra, CRTConjoint, crtests, crul, crunch, crunchy, cry, csaw, CSCNet, csdR, cSEM, CSGo, CSHShydRology, CSIndicators, cspp, CSSQ, CSTools, csvwr, CTCF, CTDquerier, ctf, ctgGEM, ctmcd, ctmle, ctmm, CTP, ctpm, cTRAP, ctrdata, ctrialsgov, ctsGE, ctv, cubature, cubble, Cubist, cultevo, cumulocityr, cuperdec, curatedAdipoArray, curatedAdipoChIP, curatedAdipoRNA, curatedMetagenomicData, curatedTBData, curatedTCGAData, curephEM, curl, cursr, curstatCI, customCMPdb, cusum, cusumcharter, cutpointr, cvCovEst, cvcrand, CVEK, cvequality, cvGEE, cvms, cvwrapr, CVXR, cwbtools, cxr, cyanoFilter, cycleRtools, cyclomort, cydar, cyjShiny, cyphr, CytobankAPI, CytoDx, cytofan, CytoGLMM, cytoKernel, cytolib, cytomapper, cytoMEM, cytometree, cytominer, CytoML, CytOpT, CytoTree, czechrates, D2MCS, d3po, d3Tree, DA, DAAG, dabestr, DACF, dad, dada2, dagirlite, dagitty, dagLogo, DAIME, daiR, DAISIE, DALEXtra, dalmatian, DAMEfinder, DAMisc, dampack, dams, dann, danstat, daqapo, Dark, dartR, dashboardthemes, dashCoreComponents, dashHtmlComponents, dasper, dat, data.table, data.tree, DatabaseConnector, DatabionicSwarm, dataCompareR, DataEditR, DataFakeR, datafsm, datagovindia, dataMeta, datamods, dataone, datapack, datapasta, dataprep, dataquieR, dataRetrieval, datarobot, datasauRus, DataSpaceR, dataspice, datastepr, datastructures, dataverse, DataVisualizations, datawizard, datazoom.amazonia, datefixR, datelife, dateutils, datplot, daymetr, dbarts, dbflobr, dbhydroR, DBI, DBItest, dbMC, dbmss, dbparser, dbplyr, DBpower, dbscan, dcanr, dccmidas, dce, DCEM, DCEmgmt, DCG, dcifer, DCLEAR, dcmodify, dcmodifydb, DCSmooth, dcurves, dde, ddiv, ddp, ddpcr, dearseq, debar, debCAM, deBif, deBInfer, 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RPostgres, RPPASPACE, rpredictit, rPref, rprev, rprime, rprimer, RprobitB, rprojroot, rprojtree, RProtoBufLib, rpsftm, rptR, Rpvt, rpx, Rqc, rqdatatable, RQEntangle, rqt, rquery, Rraven, rrefine, rrMixture, RRMLRfMC, rRofex, RRphylo, RRPP, rrr, RRRR, rrscale, rrvgo, rsae, rSAFE, RSAGA, rsample, Rsampling, rscc, RScelestial, rsconnect, rscopus, rscorecard, rScudo, RSDA, rSEA, RSelenium, rsemmed, RSentiment, RSeqAn, rsetse, rsimsum, rsinaica, rslurm, rSPDE, RSpectra, rsppfp, RSQL, RSQLite, rsqliteadmin, RSqlParser, RSSL, rstan, rstanarm, rstanemax, rstantools, rstatix, rstoat, rstudioapi, rsurveycto, rsvddpd, rsvg, rSWeeP, rsyncrosim, rt, rtables, RTCC, RTCGA, RTCGA.clinical, RTCGA.CNV, RTCGA.methylation, RTCGA.miRNASeq, RTCGA.mRNA, RTCGA.mutations, RTCGA.PANCAN12, RTCGA.rnaseq, RTCGA.RPPA, RTCGAToolbox, rTCRBCRr, rtdists, rtext, rticulate, rties, RTIGER, rTLS, rtmpt, RTN, RTNduals, RTNsurvival, rtodoist, rTorch, Rtpca, Rtrack, RTransferEntropy, rtrek, rtrim, rTRM, rTRNG, Rtropical, rtry, RTTWebClient, rtweet, rubias, rucrdtw, ruin, ruler, rules, rumidas, runcharter, runibic, runner, runstats, rust, ruta, RUVcorr, rv, RVA, RVenn, RVerbalExpressions, rvest, rvg, rviewgraph, RVS, rwarrior, rwavelet, Rwclust, RWDataPlyr, rwebstat, rwhatsapp, rwicc, rWikiPathways, RWildbook, rWind, rWishart, RWmisc, RWsearch, Rwtss, rwty, RxODE, rxode2, Ryacas, Ryacas0, ryandexdirect, rym, RZooRoH, s2net, sabarsi, sabre, saccadr, SADISA, saebnocov, saeHB, saeHB.gpois, saeHB.hnb, saeHB.panel, saeHB.spatial, saeHB.twofold, saeHB.ZIB, saeHB.zinb, saekernel, saeRobust, saeSim, safedata, safejoin, safestats, safetyGraphics, sageR, SAIGEgds, salesforcer, SAMBA, samc, SAMGEP, samplesizeCMH, samplingbook, samplingDataCRT, SamplingStrata, samurais, sandwichr, SanFranBeachWater, SangerTools, sanityTracker, sankeywheel, SANTA, santaR, santoku, sanzo, saotd, sapevom, sapfluxnetr, sara4r, sarp.snowprofile, sarp.snowprofile.alignment, sars, sasfunclust, sass, sassy, satellite, satuRn, SAVER, SBICgraph, sbl, sbm, SBMSplitMerge, sbo, sbw, SC.MEB, SC2API, SC3, scaffolder, ScaledMatrix, scAlign, scalpel, scanMiR, scanMiRApp, scanMiRData, scAnnotate, scAnnotatR, SCANVIS, scapesClassification, scapGNN, scaRabee, SCArray, scATAC.Explorer, SCATE, SCATEData, scater, scatterD3, scatterHatch, scatterpie, scatterPlotMatrix, scBFA, SCBN, scbursts, scCATCH, scCB2, scClassify, scDataviz, scDblFinder, scde, scdhlm, scDiffCom, scDIFtest, scds, SCEM, SCEnt, SCFA, scFeatureFilter, scGPS, schex, scholar, scHOT, schrute, schtools, SCIBER, scifigure, scImmuneGraph, scipub, sciRmdTheme, scITD, scLink, sclr, scMAGeCK, scmap, scMappR, scMerge, scModels, SCnorm, scone, Sconify, SCOPE, scoper, SCOPRO, scorecard, scoreInvHap, scorepeak, scoringRules, scoringTools, scoringutils, SCORNET, SCORPIUS, SCOUTer, scp, scPCA, scpdata, scPipe, scPloidy, scpoisson, scran, scReClassify, scRecover, scRepertoire, SCRIP, scriptexec, scrm, scRNAseq, scrobbler, scrollrevealR, scruff, scrutiny, scry, scryr, scShapes, 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sessioninfo, SEtools, settings, sevenbridges, sevenC, sf, sfarrow, sfcr, sfdct, sfdep, sfhotspot, sfinx, sfnetworks, sfo, SFSI, sftime, sftrack, sgat, sglOptim, sgmcmc, sgmodel, sGMRFmix, SGP, SGPdata, SGSeq, sgsR, sgstar, shadowtext, shapeNA, SHAPforxgboost, ShapleyValue, shapr, shapviz, shar, SharedObject, sharp, shazam, ShellChron, shiftR, ShiftShareSE, shiny, shiny.i18n, shiny.react, shiny.reglog, shiny.semantic, shinyaframe, shinyauthr, shinybusy, shinyCohortBuilder, shinydashboardPlus, shinyEffects, shinyFeedback, shinyglide, ShinyItemAnalysis, shinyjqui, shinyjs, shinyloadtest, shinylogs, shinymanager, shinymeta, shinyML, shinyMobile, shinymodels, shinyNotes, shinyobjects, shinyPredict, shinyrecipes, shinyreforms, shinyservicebot, shinySIR, shinystan, shinyStorePlus, shinysurveys, shinytest, shinyvalidate, ShortForm, shorts, showtext, shrink, shrinkTVP, shutterstock, SI, SIAMCAT, SIBER, sicegar, sidrar, siebanxicor, sift, sigFeature, SightabilityModel, sights, sigminer, sigmoid, 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sitePath, SITH, sitmo, sitree, sivs, sizeMat, sjlabelled, sjmisc, sjPlot, sjSDM, sjtable2df, skater, skedastic, sketch, sketcher, sketching, skimr, skm, sknifedatar, skynet, skyscapeR, slackr, slalom, slanter, slasso, SleepCycles, sleev, SLEMI, slendr, slgf, slickR, SLIDE, slider, slim, slingshot, slippymath, SLOPE, slouch, slowraker, slurmR, smacof, smacpod, SMAD, SmallCountRounding, smapr, SMARTAR, SMARTbayesR, SmartMeterAnalytics, smartsizer, smcfcs, smd, SMDIC, smerc, SMFilter, smicd, smidm, smile, SMITE, smmR, SMMT, smooth, smoothr, smoots, smovie, smpic, smurf, snakecase, snapcount, snifter, snotelr, snowflakes, SNPediaR, SNPfiltR, SNPhood, SNPhoodData, snpReady, SNPRelate, snpsettest, SNSchart, SobolSequence, soc.ca, socialh, socialmixr, socialranking, socialrisk, sodium, sofa, softImpute, soilphysics, SoilR, SoilTaxonomy, soiltestcorr, sojourner, solartime, solrad, solrium, SOMbrero, sommer, SOMNiBUS, SongEvo, sonicscrewdriver, sorocs, sortable, SortedEffects, sorvi, sotkanet, soundClass, soundcorrs, soundgen, SoundShape, SoupX, SourceSet, sovereign, sp, spacesRGB, spacesXYZ, spacetime, spacyr, spAddins, SpaDES, SpaDES.addins, SpaDES.core, SpaDES.tools, spaero, spam, spamtree, Spaniel, spant, spark.sas7bdat, sparkline, sparklyr.flint, sparrow, SparseDC, sparseDOSSA, sparseEigen, sparsegl, sparseIndexTracking, sparseMatrixStats, SparseMDC, SPARSEMODr, SparseMSE, sparsenetgls, sparseR, sparsevar, SparseVFC, sparta, SPARTAAS, SPAS, spatgeom, SpatialBSS, SpatialCPie, spatialDE, SpatialDecon, spatialDmelxsim, SpatialEpi, SpatialExperiment, SpatialGEV, spatialHeatmap, SpatialKDE, spatialLIBD, SpatialPOP, SpatialPosition, spatialreg, spatialrisk, spatialsample, spatialTIME, spatialwidget, spatsoc, spatzie, spbabel, spBFA, SPCompute, spcosa, spCP, spdep, spdplyr, spduration, speakr, speaq, specklestar, specL, specr, spectacles, spectator, spectr, Spectra, spectralGraphTopology, SpectralTAD, spectre, spectrolab, sperrorest, spfilteR, spflow, spFSR, sphunif, spicyR, 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Reverse enhances: dygraphs

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