TCGAretriever: Retrieve Genomic and Clinical Data from CBioPortal Including TCGA Data

The Cancer Genome Atlas (TCGA) is a program aimed at improving our understanding of Cancer Biology. Several TCGA Datasets are available online. 'TCGAretriever' helps accessing and downloading TCGA data hosted on 'cBioPortal' via its Web Interface (see <https://www.cbioportal.org/> for more information).

Version: 1.9.1
Depends: R (≥ 3.5.0)
Imports: httr, reshape2, jsonlite
Suggests: stats, utils, knitr, rmarkdown, ggplot2, dplyr
Published: 2024-01-23
DOI: 10.32614/CRAN.package.TCGAretriever
Author: Damiano Fantini
Maintainer: Damiano Fantini <damiano.fantini at gmail.com>
License: GPL-3
URL: https://www.data-pulse.com/dev_site/TCGAretriever/
NeedsCompilation: no
In views: Omics
CRAN checks: TCGAretriever results

Documentation:

Reference manual: TCGAretriever.pdf
Vignettes: Getting Started with TCGAretriever

Downloads:

Package source: TCGAretriever_1.9.1.tar.gz
Windows binaries: r-devel: TCGAretriever_1.9.1.zip, r-release: TCGAretriever_1.9.1.zip, r-oldrel: TCGAretriever_1.9.1.zip
macOS binaries: r-release (arm64): TCGAretriever_1.9.1.tgz, r-oldrel (arm64): TCGAretriever_1.9.1.tgz, r-release (x86_64): TCGAretriever_1.9.1.tgz, r-oldrel (x86_64): TCGAretriever_1.9.1.tgz
Old sources: TCGAretriever archive

Linking:

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