PEIMAN2: Post-Translational Modification Enrichment, Integration, and Matching Analysis

Functions and mined database from 'UniProt' focusing on post-translational modifications to do single enrichment analysis (SEA) and protein set enrichment analysis (PSEA). Payman Nickchi, Uladzislau Vadadokhau, Mehdi Mirzaie, Marc Baumann, Amir Ata Saei, Mohieddin Jafari (2025) <doi:10.1002/pmic.202400238>.

Version:	1.0.0
Depends:	R (≥ 2.10)
Imports:	ggplot2, dplyr, glue, lifecycle, purrr, rlang, stringr, graphics, forcats, stats, magrittr
Suggests:	knitr, rmarkdown, testthat (≥ 3.0.0)
Published:	2025-04-08
Author:	Mohieddin Jafari [aut], Payman Nickchi [aut, cre]
Maintainer:	Payman Nickchi <payman.nickchi at gmail.com>
License:	GPL (≥ 3)
NeedsCompilation:	no
Materials:	README
CRAN checks:	PEIMAN2 results

Documentation:

Reference manual:	PEIMAN2.pdf
Vignettes:	PEIMAN2-vignette (source, R code)

Downloads:

Package source:	PEIMAN2_1.0.0.tar.gz
Windows binaries:	r-devel: PEIMAN2_0.1.0.zip, r-release: PEIMAN2_0.1.0.zip, r-oldrel: PEIMAN2_1.0.0.zip
macOS binaries:	r-devel (arm64): PEIMAN2_1.0.0.tgz, r-release (arm64): PEIMAN2_1.0.0.tgz, r-oldrel (arm64): PEIMAN2_1.0.0.tgz, r-devel (x86_64): PEIMAN2_1.0.0.tgz, r-release (x86_64): PEIMAN2_1.0.0.tgz, r-oldrel (x86_64): PEIMAN2_1.0.0.tgz
Old sources:	PEIMAN2 archive

Linking:

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