LCMSQA: Liquid Chromatography/Mass Spectrometry (LC/MS) Quality Assessment

The goal of 'LCMSQA' is to make it easy to check the quality of liquid chromatograph/mass spectrometry (LC/MS) experiments using a 'shiny' application. This package provides interactive data visualizations for quality control (QC) samples, including total ion current chromatogram (TIC), base peak chromatogram (BPC), mass spectrum, extracted ion chromatogram (XIC), and feature detection results from internal standards or known metabolites.

Version: 1.0.2
Depends: R (≥ 4.0.0)
Imports: bsplus, data.table, DT, ggplot2, methods, plotly, shiny, shinycssloaders, shinyjs, shinyWidgets
Suggests: BiocManager, xcms, MSnbase, knitr, rmarkdown
Published: 2024-01-12
DOI: 10.32614/CRAN.package.LCMSQA
Author: Jaehyun Joo [aut, cre], Blanca Himes [aut]
Maintainer: Jaehyun Joo <jaehyunjoo at>
License: GPL (≥ 3)
NeedsCompilation: no
Materials: README NEWS
In views: ChemPhys
CRAN checks: LCMSQA results


Reference manual: LCMSQA.pdf
Vignettes: Introduction to LCMSQA


Package source: LCMSQA_1.0.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): LCMSQA_1.0.2.tgz, r-oldrel (arm64): LCMSQA_1.0.2.tgz, r-release (x86_64): LCMSQA_1.0.2.tgz, r-oldrel (x86_64): LCMSQA_1.0.2.tgz
Old sources: LCMSQA archive


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