Visualization and analysis of Vectra Immunoflourescent data. Options for calculating both the univariate and bivariate Ripley's K are included. Calculations are performed using a permutation-based approach presented by Wilson et al. <doi:10.1101/2021.04.27.21256104>.
Version: | 1.3.4-5 |
Depends: | R (≥ 2.10) |
Imports: | magrittr, dplyr, tidyr, ggplot2, scales, grDevices, purrr, spatstat.univar, spatstat.geom, spatstat.explore, RColorBrewer, furrr, future, tidyselect, crayon, pbmcapply, dixon, tibble, stringr |
Suggests: | knitr, devtools, rmarkdown, testthat (≥ 3.0.0), gridExtra, pheatmap |
Published: | 2024-06-04 |
DOI: | 10.32614/CRAN.package.spatialTIME |
Author: | Jordan Creed [aut], Ram Thapa [aut], Christopher Wilson [aut], Alex Soupir [aut], Oscar Ospina [aut], Julia Wrobel [aut], Brooke Fridley [cph], Fridley Lab [cre] |
Maintainer: | Fridley Lab <fridley.lab at moffitt.org> |
BugReports: | https://github.com/FridleyLab/spatialTIME/issues |
License: | MIT + file LICENSE |
URL: | https://github.com/FridleyLab/spatialTIME |
NeedsCompilation: | no |
Citation: | spatialTIME citation info |
Materials: | README |
CRAN checks: | spatialTIME results |
Reference manual: | spatialTIME.pdf |
Vignettes: |
Introduction to spatialTIME |
Package source: | spatialTIME_1.3.4-5.tar.gz |
Windows binaries: | r-devel: spatialTIME_1.3.4-5.zip, r-release: spatialTIME_1.3.4-5.zip, r-oldrel: spatialTIME_1.3.4-5.zip |
macOS binaries: | r-devel (arm64): spatialTIME_1.3.4-5.tgz, r-release (arm64): spatialTIME_1.3.4-5.tgz, r-oldrel (arm64): spatialTIME_1.3.4-5.tgz, r-devel (x86_64): spatialTIME_1.3.4-5.tgz, r-release (x86_64): spatialTIME_1.3.4-5.tgz, r-oldrel (x86_64): spatialTIME_1.3.4-5.tgz |
Old sources: | spatialTIME archive |
Reverse suggests: | mxfda, scSpatialSIM |
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