HGNChelper: Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols

Contains functions for identifying and correcting HGNC human gene symbols and MGI mouse gene symbols which have been converted to date format by Excel, withdrawn, or aliased. Also contains functions for reversibly converting between HGNC symbols and valid R names.

Version: 0.8.1
Depends: R (≥ 3.5.0), methods, utils
Suggests: testthat, knitr, rmarkdown
Published: 2019-10-24
Author: Levi Waldron and Markus Riester
Maintainer: Levi Waldron <lwaldron.research at gmail.com>
BugReports: https://github.com/waldronlab/HGNChelper/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2.0)]
URL: https://github.com/waldronlab/HGNChelper
NeedsCompilation: no
Materials: NEWS
CRAN checks: HGNChelper results

Documentation:

Reference manual: HGNChelper.pdf
Vignettes: HGNChelper Introduction

Downloads:

Package source: HGNChelper_0.8.1.tar.gz
Windows binaries: r-devel: HGNChelper_0.8.1.zip, r-release: HGNChelper_0.8.1.zip, r-oldrel: HGNChelper_0.8.1.zip
macOS binaries: r-release (arm64): HGNChelper_0.8.1.tgz, r-oldrel (arm64): HGNChelper_0.8.1.tgz, r-release (x86_64): HGNChelper_0.8.1.tgz
Old sources: HGNChelper archive

Reverse dependencies:

Reverse imports: EWCE, MetaIntegrator, sccca
Reverse suggests: curatedTBData, DGCA, TBSignatureProfiler

Linking:

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