clustTMB: Spatio-Temporal Finite Mixture Model using 'TMB'

Fits a spatio-temporal finite mixture model using 'TMB'. Covariate, spatial and temporal random effects can be incorporated into the gating formula using multinomial logistic regression, the expert formula using a generalized linear mixed model framework, or both.

Version: 0.1.0
Depends: R (≥ 4.0.0)
Imports: cluster, clustMixType, fmesher, lme4, Matrix, mclust, methods, reformulas, MoEClust, sf, stats, TMB (≥ 1.9.0)
LinkingTo: RcppEigen, TMB
Suggests: bookdown, covr, cowplot, dplyr, FMsmsnReg, GGally, ggplot2, ggspatial, giscoR, inlabru, kableExtra, knitr, magrittr, MixSim, mvnfast, mvtnorm, palmerpenguins, rmarkdown, sdmTMB, sp, spData, splancs, testthat, tidyr, tweedie, wesanderson
Published: 2024-10-14
DOI: 10.32614/CRAN.package.clustTMB
Author: Andrea M. Havron ORCID iD [aut, cre, cph]
Maintainer: Andrea M. Havron <andrea.havron at noaa.gov>
BugReports: https://github.com/Andrea-Havron/clustTMB/issues
License: GPL-3
URL: https://github.com/Andrea-Havron/clustTMB, https://andrea-havron.github.io/clustTMB/
NeedsCompilation: yes
SystemRequirements: GNU make
Citation: clustTMB citation info
Materials: README NEWS
CRAN checks: clustTMB results

Documentation:

Reference manual: clustTMB.pdf
Vignettes: Covariance Structure (source, R code)
Meuse Data Example (source, R code)

Downloads:

Package source: clustTMB_0.1.0.tar.gz
Windows binaries: r-devel: clustTMB_0.1.0.zip, r-release: clustTMB_0.1.0.zip, r-oldrel: clustTMB_0.1.0.zip
macOS binaries: r-release (arm64): clustTMB_0.1.0.tgz, r-oldrel (arm64): clustTMB_0.1.0.tgz, r-release (x86_64): clustTMB_0.1.0.tgz, r-oldrel (x86_64): clustTMB_0.1.0.tgz

Linking:

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