Last updated on 2025-05-12 13:51:01 CEST.
| Package | FAIL | NOTE | OK |
|---|---|---|---|
| graphsim | 2 | 11 | |
| leiden | 1 | 5 | 7 |
| matrixcalc | 2 | 11 | |
| vioplot | 13 |
Current CRAN status: NOTE: 2, OK: 11
Version: 1.0.3
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘S. Thomas Kelly <tomkellygenetics@gmail.com>’
Problems when reading CITATION file:
no package 'graphsim' was found
Package CITATION file contains call(s) to old-style personList() or
as.personList(). Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry(). Please
use bibentry() instead.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Current CRAN status: FAIL: 1, NOTE: 5, OK: 7
Version: 0.4.3.1
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘S. Thomas Kelly <tomkellygenetics@gmail.com>’
The Description field contains
to Leiden: guaranteeing well-connected communities. <arXiv:1810.08473>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.4.3.1
Check: re-building of vignette outputs
Result: FAIL
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:
+ table(partition)
+
+ # pass weights to python leidenalg
+ adjacency_matrix[adjacency_matrix >= 1 ] <- 1
+ my_graph <- graph_from_adjacency_matrix(adjacency_matrix, weighted = NULL)
+ weights <- sample(1:10, sum(adjacency_matrix!=0), replace=TRUE)
+ partition <- leiden(my_graph, weights = weights)
+ table(partition)
+
+ # run only if python is available (for testing)
+ }
>
>
>
>
> ### * <FOOTER>
> ###
> cleanEx()
> options(digits = 7L)
> base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
Time elapsed: 2.73 0.7 117.31 NA NA
> grDevices::dev.off()
null device
1
> ###
> ### Local variables: ***
> ### mode: outline-minor ***
> ### outline-regexp: "\\(> \\)?### [*]+" ***
> ### End: ***
> quit('no')
======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-devel-windows-x86_64
Version: 0.4.3.1
Check: installed package size
Result: NOTE
installed size is 5.5Mb
sub-directories of 1Mb or more:
doc 5.3Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: NOTE: 2, OK: 11
Version: 1.0-6
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘S. Thomas Kelly <tomkellygenetics@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Frederick",
family = "Novomestky",
role = "aut",
email = "fnovomes@poly.edu"),
person(given = c("S.", "Thomas"),
family = "Kelly",
role = "cre",
email = "tomkellygenetics@gmail.com"))
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Current CRAN status: OK: 13