# # mncyclib.pm # library module for monocyclic compounds # print "module mncyclib version 1.1 2000-01-17\n"; # Zyklobutan # parameter: "cb", , , startpos, bliste, radius sub cb_default_ { my ($iAnz, $p1, $iAngle, $iStart, $BT, $bAromat, $rRadius) = @_; $$iAnz = 4; $$iStart = $$p1 = $$iAngle = 0; $$rRadius = $rLenN; $$bAromat = $false; @$BT = (9, 9, 0, 0); } sub cb_ { my ($XYstart, $rRadius, $rRadius_bak, $iAnz, $p1, $iAngle, $iStart, $M, $rLena, $rThetaa, $XYa, $BLa, $t, $b, $r) = @_; $$rRadius_bak = $$rRadius = abs($$rRadius); $$XYa[0] = loc->new(0,0); $$XYa[1] = getpos($$XYa[0], -130, $$rRadius); $$XYa[2] = getpos($$XYa[1], 140, $$rRadius); $$XYa[3] = getpos($$XYa[2], -30, $$rRadius*1.5); @$rThetaa = (-130, 140, -30, getangle($$XYa[3], $$XYa[0])); @$rLena = ($$rRadius, $$rRadius, $$rRadius*1.5, getlength($$XYa[3], $$XYa[0])); grep(($_->rotate($iAngle) && 0), @$XYa); my $XYshift = loc->new($$XYa[$iStart]); grep(($_->translate(- $XYshift->{"x"}, - $XYshift->{"y"}) && 0), @$XYa); grep(($_->translate($XYstart) && 0), @$XYa); $M->eq(0,0); $M->translate($XYstart); @$BLa = (0, 1, 2, 3); # start atom @$r = (60, -100, 150, -60); @$t = (120, 170, 90, 30); @$b = (30, -90, -150, -90); grep((($_ += $iAngle) && 0), @$r, @$t, @$b, @$rThetaa); } # Zyklopentan envelope-Konformation # parameter: "cp", conformertyp, , startpos, bliste, radius sub cp_default_ { my ($iAnz, $conf, $iAngle, $iStart, $BT, $bAromat, $rRadius) = @_; $$iAnz = 5; $$iStart = $$conf = $$iAngle = 0; $$rRadius = $rLenN; $$bAromat = $false; @$BT = (9, 9, 0, 0, 0); } sub cp_ { my ($XYstart, $rRadius, $rRadius_bak, $iAnz, $conf, $iAngle, $iStart, $M, $rLena, $rThetaa, $XYa, $BLa, $t, $b, $r) = @_; $$rRadius_bak = $$rRadius = abs($$rRadius); $$XYa[0] = loc->new(0,0); if ($conf == 0) { $$XYa[1] = getpos($$XYa[0], -120, $$rRadius*1.5); $$XYa[2] = getpos($$XYa[1], 170, $$rRadius); $$XYa[3] = getpos($$XYa[2], 20, $$rRadius); $$XYa[4] = getpos($$XYa[3], -10, $$rRadius); @$rThetaa = (-120, 170, 20, -10, getangle($$XYa[4], $$XYa[0])); @$rLena = ($$rRadius*1.5, $$rRadius, $$rRadius, $$rRadius, getlength($$XYa[4], $$XYa[0])); @$r = (80, -60, -170, 110, -50); @$t = (150, 30, 150, 150, 30); @$b = (30, -90, -90, -90, -90); } elsif ($conf == 1) { $$XYa[1] = getpos($$XYa[0], -160, $$rRadius); $$XYa[2] = getpos($$XYa[1], 170, $$rRadius); $$XYa[3] = getpos($$XYa[2], 100, $$rRadius); $$XYa[4] = getpos($$XYa[0], 170, $$rRadius); @$rThetaa = (-160, 170, 100, getangle($$XYa[3], $$XYa[4]), -10); @$rLena = ($$rRadius, $$rRadius, $$rRadius, getlength($$XYa[3], $$XYa[4]), $$rRadius); @$r = (0, -60, -150, 120, 60); @$t = (90, 90, 150, 90, 90); @$b = (-30, -60, -90, -150, -150); } elsif ($conf == 2) { $$XYa[1] = getpos($$XYa[0], -160, $$rRadius); $$XYa[2] = getpos($$XYa[1], 140, $$rRadius*1.5); $$XYa[4] = getpos($$XYa[0], 170, $$rRadius); $$XYa[3] = getpos($$XYa[4], -160, $$rRadius); @$rThetaa = (-160, 140, getangle($$XYa[2], $$XYa[3]), 20, -10); @$rLena = ($$rRadius, $$rRadius*1.5, getlength($$XYa[2], $$XYa[3]), $$rRadius, $$rRadius); @$r = (0, -90, 120, -120, 90); @$t = (90, 0, 60, 150, 90); @$b = (-30, -90, 180, -90, -60); } elsif ($conf == 3) { $$XYa[1] = getpos($$XYa[0], -160, $$rRadius); $$XYa[2] = getpos($$XYa[1], 140, $$rRadius); $$XYa[3] = getpos($$XYa[2], 20, $$rRadius); $$XYa[4] = getpos($$XYa[0], 100, $$rRadius*1.5); @$rThetaa = (-160, 140, 20, getangle($$XYa[3], $$XYa[4]), -80); @$rLena = ($$rRadius, $$rRadius, $$rRadius, getlength($$XYa[3], $$XYa[4]), $$rRadius*1.5); @$r = (-30, -90, 180, -60, 80); @$t = (30, -10, 90, 120, 150); @$b = (-90, -90, -150, -90, 30); } grep(($_->rotate($iAngle) && 0), @$XYa); my $XYshift = loc->new($$XYa[$iStart]); grep(($_->translate(- $XYshift->{"x"}, - $XYshift->{"y"}) && 0), @$XYa); grep(($_->translate($XYstart) && 0), @$XYa); $M->eq(0,0); $M->translate($XYstart); @$BLa = (0, 1, 2, 3, 4); # start atom grep((($_ += $iAngle) && 0), @$r, @$t, @$b, @$rThetaa); } # Furanosering # parameter: "furanose", , , startpos, bliste, radius sub furanose_default_ { my ($iAnz, $conf, $iAngle, $iStart, $BT, $bAromat, $rRadius) = @_; $$iAnz = 5; $$iStart = $$conf = $$iAngle = 0; $$rRadius = $rLenN; $$bAromat = $false; @$BT = (0, 9, 9, 9, 0); } sub furanose_ { my ($XYstart, $rRadius, $rRadius_bak, $iAnz, $conf, $iAngle, $iStart, $M, $rLena, $rThetaa, $XYa, $BLa, $t, $b, $r) = @_; $$rRadius_bak = $$rRadius = abs($$rRadius); $$XYa[0] = loc->new(0,0); $$XYa[1] = getpos($$XYa[0], -30, $$rRadius*2/sqrt(3)); $$XYa[2] = getpos($$XYa[1], -120, $$rRadius); $$XYa[3] = getpos($$XYa[2], 180, $$rRadius); $$XYa[4] = getpos($$XYa[3], 120, $$rRadius); @$rThetaa = (-30, -120, 180, 120,30); @$rLena = ($$rRadius*2/sqrt(3), $$rRadius, $$rRadius, $$rRadius, $$rRadius*2/sqrt(3)); @$r = (90, 30, -60, -120, 150); @$t = (150, 60, 0, -60, -150); @$b = (30, -30, -120, 180, 120); grep(($_->rotate($iAngle) && 0), @$XYa); my $XYshift = loc->new($$XYa[$iStart]); grep(($_->translate(- $XYshift->{"x"}, - $XYshift->{"y"}) && 0), @$XYa); grep(($_->translate($XYstart) && 0), @$XYa); $M->eq(0,0); $M->translate($XYstart); @$BLa = (0, 1, 2, 3, 4); # start atom grep((($_ += $iAngle) && 0), @$r, @$t, @$b, @$rThetaa); }