Overall license
===============

scDHA: Single-Cell Decomposition using Hierarchical Autoencoder 
Copyright (C) 2021-2021  Duc Tran

This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.

This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.

You should have received a copy of the GNU General Public License
along with this program.  If not, see <http://www.gnu.org/licenses/>.

The years in the copyright notice above are to be understood as a
range, including the years on both ends.

Remarks
=======

-----------------
k-nearest neighbor spectral clustering
-----------------

The code in:
- R/SC.R

was adapted from third-party code to which the following applies:

Copyright 2016-2021 Klaus Schliep

kknn is licensed under the GPLv2.

-----------------
weighted ensemble clustering
-----------------------

The code in:
- R/wMetaC.R

was adapted from third-party code to which the following applies:

SHARP

Copyright © 2018-2021 Shibiao Wan

All rights reserved

SHARP is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.

SHARP is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.

You should have received a copy of the GNU General Public License
along with this program.  If not, see <https://www.gnu.org/licenses/>.

-----------------
Rphenograph
-----------------

The code in:
- R/PG.R
- src/Supprot.cpp

was adapted from third-party code to which the following applies:

Copyright 2015-2021 Hao Chen

Rphenograph is licensed under the Artistic-2.0.