## ----include = FALSE----------------------------------------------------------
knitr::opts_chunk$set (
    collapse = TRUE,
    comment = "#>"
)

## ----library------------------------------------------------------------------
library (pkgmatch)

## ----match-text-1-fakey, eval = FALSE-----------------------------------------
# input <- "genomics and transcriptomics sequence location data"
# pkgmatch_similar_pkgs (input, corpus = "ropensci")

## ----redef-sim-pkgs1, eval = TRUE, echo = FALSE-------------------------------
c ("biomartr", "traits", "phylotaR", "phruta", "rebird")

## ----match-text-1-fakey-return, eval = FALSE----------------------------------
# p <- pkgmatch_similar_pkgs (input, corpus = "ropensci")
# head (p)

## ----match-text-1-return, eval = TRUE, echo = FALSE---------------------------
data.frame (
    package = c ("biomartr", "traits", "phylotaR", "phruta", "rebird"),
    rank = 1:5
)

## ----match-text-2-cran-fakey, eval = FALSE------------------------------------
# pkgmatch_similar_pkgs (input, corpus = "cran")

## ----redef-sim-pkgs2, eval = TRUE, echo = FALSE-------------------------------
c ("omicsTools", "ggalign", "omixVizR", "singleCellHaystack", "spatialGE")

## ----odbc-cran-match-fakey, eval = FALSE--------------------------------------
# u <- "https://cran.r-project.org/src/contrib/Archive/odbc/odbc_1.5.0.tar.gz"
# destfile <- file.path (tempdir (), basename (u))
# download.file (u, destfile = destfile, quiet = TRUE)
# pkgmatch_similar_pkgs (destfile, corpus = "cran")

## ----odbc-cran-match, echo = FALSE, eval = TRUE-------------------------------
c ("odbc", "RODBC", "DatabaseConnector", "dbplyr", "reticulate")

## ----odbc-match-head-fakey, eval = FALSE--------------------------------------
# p <- pkgmatch_similar_pkgs (destfile, corpus = "cran")
# head (p)

## ----odbc-cran-match-head, echo = FALSE, eval = TRUE--------------------------
data.frame (
    package = c ("odbc", "RODBC", "DatabaseConnector", "dbplyr", "reticulate"),
    version = c ("1.6.4.1", "1.3-26.1", "7.1.0", "2.5.2", "1.45.0"),
    rank = 1:5
)