2018-07-02 11:52  mathieu_ribatet

	* NAMESPACE: Import model.frame and na.pass from 'stats'

2018-06-20 11:28  mathieu_ribatet

	* R/utils.R, src/utils.c: Allows NA values in predictions. Thanks
	  to Joel Zeder for finding this gap ;-)

2018-05-28 11:15  mathieu_ribatet

	* NAMESPACE, R/methods.R, R/predict.R, R/psplines.R,
	  man/predict.Rd, man/print.Rd, vignettes/SpatialExtremesGuide.Rnw:
	  Rename pspline methods to pspline2 (issue with another package)

2018-05-28 11:09  mathieu_ribatet

	* R/modeldef.R: Fix a bug with the design matrix when there are
	  missing values. Thanks to Joel Zeder!

2018-05-28 09:10  mathieu_ribatet

	* src/maxStableExactSimulation.c: Fix a bug for the exact
	  simulation from Schlather process. Thanks to Alec Stephenson for
	  this bug hunt!!!

2018-01-05 12:58  mathieu_ribatet

	* DESCRIPTION, NEWS: Fix some warnings that appear with a new
	  release of R.

2018-01-05 12:56  mathieu_ribatet

	* R/selection.R, R/smith.R, vignettes/SpatialExtremes.sty,
	  vignettes/SpatialExtremesGuide.Rnw: Fix some warnings that appear
	  with a new release of R.

2017-12-12 11:17  mathieu_ribatet

	* src/condsimMaxStab.c: Free some "unfreed" objects--sorry about
	  that memory ;-)

2017-09-15 11:16  mathieu_ribatet

	* DESCRIPTION, NEWS, R/modelChecking.R, R/simmaxstab.R: Fix a bug
	  with the simulation from geometric processes. Thanks Zhuo Wang!

2017-08-24 15:14  mathieu_ribatet

	* R/simmaxstab.R: Fix a bug in allocation

2017-08-24 14:56  mathieu_ribatet

	* man/concprob.Rd: Update the reference article

2017-08-24 14:55  mathieu_ribatet

	* man/concprob.Rd: Change the example (now nicer)

2017-08-24 14:46  mathieu_ribatet

	* ChangeLog: Update ChangeLog

2017-08-24 14:44  mathieu_ribatet

	* DESCRIPTION, NEWS, src/madogram.c, src/pairwiselik.c: Use OpenMP
	  when it does speed things (pairwise likelihood)

2017-08-21 14:28  mathieu_ribatet

	* R/simmaxstab.R, src/header.h, src/init.c,
	  src/maxStableExactSimulation.c: Allows for exact simulation for
	  all max-stable models (except geometric)

2017-08-20 11:41  mathieu_ribatet

	* DESCRIPTION: Summary: Spelling

2017-08-18 13:03  mathieu_ribatet

	* ChangeLog: Update ChangeLog

2017-08-18 12:50  mathieu_ribatet

	* NEWS: Update NEWS

2017-08-18 12:47  mathieu_ribatet

	* DESCRIPTION, NAMESPACE, R/brownresnick.R, R/concurrence.R,
	  R/condSimMaxStab.R, R/conditionalSim.R, R/copula.R, R/extcoeff.R,
	  R/extremalt.R, R/fitcovmat.R, R/geomgauss.R, R/kriging.R,
	  R/latentVariable.R, R/madogram.R, R/maxLinear.R, R/randomlines.R,
	  R/schlather.R, R/schlatherind.R, R/simgaussproc.R,
	  R/simmaxstab.R, R/smith.R, R/spatgev.R, R/standardErrors.R,
	  R/univfit.R, R/utils.R, src/Makevars, src/header.h, src/init.c:
	  Finally the package now registers native routine (what a job!!!)

2017-08-18 12:46  mathieu_ribatet

	* R/circulant.R: Remove an empty R file

2017-08-17 13:29  mathieu_ribatet

	* man/SpatialExtremes-package.Rd: Remove a non existing URL

2017-08-17 13:28  mathieu_ribatet

	* src/init.c: Add registration of C code as now required by CRAN

2017-08-17 13:28  mathieu_ribatet

	* src/utils.c: Remove pragma parallel instruction (slows my code
	  :-()

2017-08-17 13:26  mathieu_ribatet

	* R/simmaxstab.R: A small fix

2017-08-17 12:32  mathieu_ribatet

	* R/exploratoryAnalysis.R: Fix a bug in the legend of symbol when
	  using mean or median

2017-08-16 14:00  mathieu_ribatet

	* vignettes/SpatialExtremes.sty,
	  vignettes/SpatialExtremesGuide.Rnw, vignettes/layout.sty: Rename
	  layout.sty to SpatialExtremes.sty as I got an email about this
	  from CRAN

2017-08-16 13:59  mathieu_ribatet

	* man/fitmaxstab.Rd: Minor change

2017-08-16 13:58  mathieu_ribatet

	* src/concurrence.c, src/covariance.c, src/direct.c,
	  src/fitcovmat.c, src/header.h, src/latentVariable.c,
	  src/madogram.c, src/maxStableExactSimulation.c,
	  src/pairwiselik.c, src/weightedPairwiselik.c: Removing pragma
	  parallel for instruction since it slows the code (at least on
	  MacOS). Seems like I'm not very good at parallelizing my code :-(

2017-08-16 13:55  mathieu_ribatet

	* R/exploratoryAnalysis.R: Try to fix the legend anotation when
	  using which != "gev"

2017-01-24 15:32  mathieu_ribatet

	* DESCRIPTION: Dummy modification (request from R-forge to check a
	  problem)

2017-01-18 12:01  mathieu_ribatet

	* src/utils.c: small improvement

2017-01-11 08:28  mathieu_ribatet

	* DESCRIPTION, R/concurrence.R, R/simmaxstab.R, man/concprob.Rd,
	  man/concurrencemap.Rd, src/concurrence.c, src/header.h: Add the
	  exact simulation for max-stable processes and a fix for
	  Brown-Resnick processes.

	  Allows for parallelization throughout the code whenever possible

	  Add the computation of standard errors for the concurrence
	  probabilities

2016-11-07 15:48  mathieu_ribatet

	* NAMESPACE, R/concurrence.R, R/simmaxstab.R, man/concprob.Rd,
	  src/brownResnick.c, src/concurrence.c, src/copula.c,
	  src/direct.c, src/extcoeff.c, src/extremalt.c, src/geomgauss.c,
	  src/kriging.c, src/latentVariable.c, src/madogram.c,
	  src/maxStableExactSimulation.c, src/pairwiselik.c,
	  src/schlather.c, src/schlatherind.c, src/univllik.c, src/utils.c,
	  src/weightedPairwiselik.c: Try to (re)use openmp with the package

2016-11-07 09:52  mathieu_ribatet

	* src/covariance.c, src/direct.c, src/fitcovmat.c,
	  src/maxStableExactSimulation.c, src/pairwiselik.c: Working on
	  exact simulation for max-stable processes and (re)implementation
	  of openmp support

2016-11-04 16:41  mathieu_ribatet

	* R/simmaxstab.R, src/header.h, src/maxStableExactSimulation.c:
	  Exact simulation for Brown--Resnick processes are now available

2016-11-04 16:40  mathieu_ribatet

	* src/covariance.c, src/direct.c: Minor speed optimization

2016-10-18 15:33  mathieu_ribatet

	* R/modelChecking.R: Just add a short comment

2016-10-18 15:15  mathieu_ribatet

	* R/modelChecking.R: Summary: Faster version (and correct!) version
	  for the bootstrap
	  confidence intervals.

2016-10-15 09:46  mathieu_ribatet

	* src/maxStableExactSimulation.c: Just a small change to allow for
	  compilation. The code is still broken though.

2016-10-14 15:44  mathieu_ribatet

	* R/utils.R: Summary: Fix a bug with handling NA values in the
	  switch to unit
	  Frechet margins using the empirical CDF. Thanks to Kate Robinson
	  Saunders for this!!!

2016-10-14 14:13  mathieu_ribatet

	* R/simmaxstab.R: ## Lines starting with '## ' will be removed from
	  the log message.
	  ## File(s) to commit recursively:
	  ## pkg/src/maxStableExactSimulation.c
	  Start working on exact simulation for max-stable processes

2016-10-14 14:07  mathieu_ribatet

	* src/header.h: Start working on exact simulation for max-stable
	  processes

2016-10-14 14:07  mathieu_ribatet

	* src/maxStableExactSimulation.c: Start working on exact simulation
	  for max-stable processes

2016-10-14 14:04  mathieu_ribatet

	* R/modelChecking.R: Faster version for the bootstrap confidence
	  intervals.

2016-10-14 14:04  mathieu_ribatet

	* DESCRIPTION: Update my email

2016-08-31 11:09  mathieu_ribatet

	* src/pairwiselik.c, src/weightedPairwiselik.c: Better handling of
	  the pairwise likelihood for the Smith model

2015-10-15 08:16  mathieu_ribatet

	* R/concurrence.R: Summary: Add the option to get personalized x
	  and y labels for the
	  axis

2015-06-10 06:13  mathieu_ribatet

	* man/symbolplot.Rd: Summary: Document argument scale in
	  symbolplot.

2015-06-09 14:54  mathieu_ribatet

	* R/exploratoryAnalysis.R:

2015-06-09 12:54  mathieu_ribatet

	* R/concurrence.R: Summary: Diverging version between computers.
	  Grrrrr

2015-06-09 12:47  mathieu_ribatet

	* R/concurrence.R: Summary: Diverging version between computers.
	  Grrrrr

2015-06-09 09:14  mathieu_ribatet

	* man/USHCNTemp.Rd: Summary: Add require(maps) in the example

2015-06-08 18:03  mathieu_ribatet

	* R/plots.R: Summary: Remove printing info while browsing the
	  Markov chain

2015-06-08 17:27  mathieu_ribatet

	* man/concurrencemap.Rd: Faster example

2015-06-08 17:26  mathieu_ribatet

	* man/windgust.Rd: Doc. for wind gust data set

2015-06-08 17:26  mathieu_ribatet

	* DESCRIPTION, NAMESPACE, R/exploratoryAnalysis.R: Some update for
	  EVA

2015-06-08 16:19  mathieu_ribatet

	* R/concurrence.R: Summary: Fix a bug with plot.border

2015-06-08 15:22  mathieu_ribatet

	* R/extremalt.R, R/madogram.R: Fix minor bugs

2015-06-08 15:22  mathieu_ribatet

	* inst/Copyright: Move copyright to the inst folder

2015-06-08 15:21  mathieu_ribatet

	* Copyright: Move copyright to the inst folder

2015-06-08 15:21  mathieu_ribatet

	* inst: Add the inst folder

2015-06-08 15:13  mathieu_ribatet

	* man/concurrencemap.Rd: Summary: Change the documentation to get
	  faster executing example

2015-06-08 15:05  mathieu_ribatet

	* data/netherlands.RData: Remove the gadm Netherlands data set

2015-06-08 15:05  mathieu_ribatet

	* data/USHCNTemp.RData, man/USHCNTemp.Rd: Add the USHCN temperature
	  data set

2015-06-08 15:02  mathieu_ribatet

	* man/logLik.maxstab.Rd: Unify log likelihood extraction methods
	  into a single Rd file

2015-06-08 15:01  mathieu_ribatet

	* man/concurrencemap.Rd: Documenting the concurrencemap function

2015-06-08 15:00  mathieu_ribatet

	* man/logLik.Rd: Unify log likelihood extraction methods into a
	  single Rd file

2015-06-08 15:00  mathieu_ribatet

	* man/predict.Rd: Unify predicting methods into a single Rd file

2015-06-08 15:00  mathieu_ribatet

	* man/predict.copula.Rd, man/predict.maxstab.Rd,
	  man/predict.pspline.Rd, man/predict.spatgev.Rd: Unify predictin
	  methods into a single Rd file

2015-06-08 14:59  mathieu_ribatet

	* man/print.Rd: Unify printing methods into a single Rd file

2015-06-08 14:59  mathieu_ribatet

	* man/print.copula.Rd, man/print.latent.Rd, man/print.maxstab.Rd,
	  man/print.pspline.Rd, man/print.spatgev.Rd: Unify printing
	  methods into a single Rd file

2015-06-08 14:59  mathieu_ribatet

	* man/windgust.Rd: Add the wind gust data set

2015-06-08 14:58  mathieu_ribatet

	* DESCRIPTION, R/concurrence.R, R/exploratoryAnalysis.R,
	  R/predict.R, man/anova.Rd, man/internals.Rd, man/rainfall.Rd,
	  man/swissalt.Rd, man/symbolplot.Rd: Minor changes

2015-06-08 12:34  mathieu_ribatet

	* R/concurrence.R: Add plot.border option to concarea

2015-06-08 11:54  mathieu_ribatet

	* DESCRIPTION: Update description file (not finalized though)

2015-06-08 11:54  mathieu_ribatet

	* R/exploratoryAnalysis.R: Fix partial arguments matching

2015-06-08 11:54  mathieu_ribatet

	* src/direct.c, src/latentVariable.c, src/simBrownResnick.c,
	  src/simextremalt.c, src/simgeometric.c, src/simschlather.c,
	  src/standardErrors.c: Fix compiler complaints/warnings

2015-06-08 11:53  mathieu_ribatet

	* man/symbolplot.Rd: Fix argument partial match

2015-06-08 11:53  mathieu_ribatet

	* R/swiss.R: Fix non ASCII character

2015-06-05 11:29  mathieu_ribatet

	* R/methods.R: Summary: Fix a typo (white spaces) in printing
	  spatgev objects

2015-06-02 15:58  mathieu_ribatet

	* data/wind.RData: Update the wind gust data set

2015-05-29 08:35  mathieu_ribatet

	* R/exploratoryAnalysis.R: Summary: Try to improve symbolplot to
	  allow for a legend. Not yet done!

2015-05-28 21:17  mathieu_ribatet

	* R/swiss.R: Fix the aspect ratio so that Switzerland will never be
	  deformed ;-)

2015-05-28 21:17  mathieu_ribatet

	* data/wind.RData: Add wind gust data set

2015-05-28 21:16  mathieu_ribatet

	* R/exploratoryAnalysis.R, data/netherlands.RData,
	  man/symbolplot.Rd: Add symbol plots

2015-05-28 18:29  mathieu_ribatet

	* data/wind.RData: Add wind gust data set

2015-05-28 18:29  mathieu_ribatet

	* DESCRIPTION, R/concurrence.R, R/utils.R: Work in progress for
	  concurrence cell area

2015-05-28 15:13  mathieu_ribatet

	* vignettes/SpatialExtremesGuide.Rnw: Summary: One keyword per
	  \VignetteKeyword macro

2015-05-28 14:59  mathieu_ribatet

	* man/condrmaxstab.Rd, src/header.h: Small edits

2015-05-28 14:58  mathieu_ribatet

	* R/concurrence.R, man/concprob.Rd, src/concurrence.c: Add code for
	  the concurrence probabilities.

2015-05-28 14:57  mathieu_ribatet

	* R/brownresnick.R, R/extremalt.R, R/schlather.R: Add the extremal
	  concurrence probability function to the fitted
	  max-stable processes.

2015-05-27 11:31  mathieu_ribatet

	* R/condSimMaxStab.R: Small editing + fix

2014-01-14 10:15  mathieu_ribatet

	* R/fitcovmat.R: Change starting values for the extremal-t process

2014-01-14 10:15  mathieu_ribatet

	* R/condSimMaxStab.R, src/condsimMaxStab.c, src/header.h: Add
	  routines for conditional simulation from extremal-t processes

2014-01-14 10:14  mathieu_ribatet

	* src/pairwiselik.c: Small improvements (factorize expression to
	  speed up code)

2013-06-06 07:27  mathieu_ribatet

	* R/selection.R: Better formatting of the anova table

2013-06-04 18:48  mathieu_ribatet

	* R/brownresnick.R, R/extremalt.R, R/geomgauss.R, R/schlather.R,
	  R/schlatherind.R, R/smith.R, R/spatgev.R, R/standardErrors.R: Fix
	  a bug with recent changes on standard errors and missing values.
	  Now fixed!

2013-06-04 16:14  mathieu_ribatet

	* src/standardErrors.c: Fix a bug!

2013-06-03 11:48  mathieu_ribatet

	* R/utils.R: Allows for missing values

2013-06-03 11:47  mathieu_ribatet

	* src/madogram.c: Allows for missing values in madogram (but *not*
	  to the lambda madogram)

2013-06-03 11:47  mathieu_ribatet

	* R/modelChecking.R: Allows for missing values in model checking of
	  max-stable processes

2013-06-03 11:46  mathieu_ribatet

	* R/madogram.R: Allows for missing values in madogram (but *not* to
	  the lambda madogram)

2013-05-30 15:28  mathieu_ribatet

	* DESCRIPTION: update version number

2013-03-04 10:21  mathieu_ribatet

	* ChangeLog, DESCRIPTION, NEWS: Update the description, news and
	  changlog files for release 2.0-0

2013-03-04 10:13  mathieu_ribatet

	* src/latentVariable.c: Fix a bug related to the mean of the prior
	  distribution assumed on the regression parameters!

2013-03-04 10:06  mathieu_ribatet

	* R/condSimMaxStab.R: Fix a bug when no conditional simulation were
	  performed.

2013-03-04 09:58  mathieu_ribatet

	* R/latentVariable.R: Missing values are now supported.

2013-03-04 09:57  mathieu_ribatet

	* R/brownresnick.R, R/extremalt.R, R/fitmaxstable.R, R/geomgauss.R,
	  R/methods.R, R/profile.R, R/schlather.R, R/schlatherind.R,
	  R/smith.R, R/spatgev.R, R/standardErrors.R, R/starting.values.R,
	  R/univfit.R, man/TIC.Rd, man/condmap.Rd, man/covariance.Rd,
	  man/fitmaxstab.Rd, man/fitspatgev.Rd, man/map.Rd,
	  src/pairwiselik.c, src/spatgevlik.c, src/standardErrors.c,
	  src/standardErrorsCommonPart.c, src/univllik.c, src/utils.c,
	  src/weightedPairwiselik.c, vignettes/SpatialExtremesGuide.Rnw:
	  Missing values are now supported. Change the way standard errors
	  are computed.

2013-01-28 10:49  mathieu_ribatet

	* R/zzz.R: .First.lib() is no longer useful.

2013-01-28 10:48  mathieu_ribatet

	* DESCRIPTION: Forgot the authorship in the DESCRIPTION file.

2013-01-24 07:36  mathieu_ribatet

	* src/fft.c, src/header.h: Add fft routine since they do not belong
	  to the R API...

2013-01-23 12:30  mathieu_ribatet

	* DESCRIPTION, src/header.h: Add the fft routine as they do not
	  belong to the R API.

2013-01-23 12:29  mathieu_ribatet

	* Copyright, src/fft.c: Add the fft routine as they do not belong
	  to the R API

2012-11-27 08:11  mathieu_ribatet

	* R/simmaxstab.R: Add more details for an error according to a
	  suggestion of Carlo
	  Gaetan.

2012-10-31 12:50  mathieu_ribatet

	* man/predict.copula.Rd: Reduce the complexity of the example
	  according to CRAN policies.

2012-10-25 12:21  mathieu_ribatet

	* man/internals.Rd: Add several simulation techniques for
	  Brown-Resnick processes

2012-10-25 12:21  mathieu_ribatet

	* R/simmaxstab.R, src/header.h, src/simBrownResnick.c: Add several
	  simulation techniques for Brown-Resnick processes

2012-10-24 08:46  mathieu_ribatet

	* man/condrmaxstab.Rd: Small fix.

2012-10-24 08:00  mathieu_ribatet

	* R/condSimMaxStab.R: Small fix

2012-10-24 07:46  mathieu_ribatet

	* R/condSimMaxStab.R: Small fix

2012-10-24 07:41  mathieu_ribatet

	* NEWS: Update the NEWS

2012-10-24 07:35  mathieu_ribatet

	* ChangeLog: Update the ChangeLog

2012-10-24 07:30  mathieu_ribatet

	* DESCRIPTION: Update the version number

2012-10-24 07:29  mathieu_ribatet

	* src/header.h: Add the headers for the conditional simulation
	  functions of max-stable processes

2012-10-24 07:29  mathieu_ribatet

	* man/simmaxstab.Rd: Fix a missing link in the documentation

2012-10-24 07:28  mathieu_ribatet

	* R/condSimMaxStab.R, man/condrmaxstab.Rd, src/condsimMaxStab.c:
	  Add functions and documentation for conditional simulation of
	  max-stable processes

2012-07-10 12:06  mathieu_ribatet

	* src/simBrownResnick.c: Remove the printf calls

2012-07-10 11:41  mathieu_ribatet

	* src/utils.c: Fix a bug with temporal trend--these were not
	  initialized---hmmm hmmm!

2012-07-10 11:40  mathieu_ribatet

	* src/spatgevlik.c: Small edits for nicer code

2012-07-10 11:39  mathieu_ribatet

	* R/modelChecking.R: Implement model checking for the extremal-t
	  process

2012-07-10 11:39  mathieu_ribatet

	* R/copula.R: Fix a bug in simulating a Student copula on a grid.

2012-06-13 11:53  mathieu_ribatet

	* R/simmaxstab.R: Implementing different (naive) simulation
	  techniques for
	  Brown--Resnick processes

2012-06-13 11:52  mathieu_ribatet

	* src/header.h: Implementing different (naive) simulation
	  techniques for
	  Brown--Resnick processes

2012-06-13 11:52  mathieu_ribatet

	* src/simBrownResnick.c: Implementing different (naive) simulation
	  techniques for
	  Brown--Resnick processes

2012-06-13 11:50  mathieu_ribatet

	* src/utils.c: Cleaning the code

2012-06-05 13:51  mathieu_ribatet

	* man/map.latent.Rd, man/plot.copula.Rd: Don't run the example to
	  save execution times

2012-06-05 13:51  mathieu_ribatet

	* man/fitcopula.Rd: Don't run the example to save execution times

2012-06-05 13:50  mathieu_ribatet

	* src/pairwiselik.c: Comment the OpenMP directive since it is not
	  really efficient

2012-06-05 13:50  mathieu_ribatet

	* src/fitcovmat.c: Small optimization

2012-06-05 13:50  mathieu_ribatet

	* src/copula.c: Small optimization

2012-05-22 14:18  mathieu_ribatet

	* src/brownResnick.c, src/circulant.c, src/copula.c,
	  src/covariance.c, src/direct.c, src/extremalt.c, src/fitcovmat.c,
	  src/geomgauss.c, src/kriging.c, src/schlather.c,
	  src/simBrownResnick.c, src/simextremalt.c, src/simgeometric.c,
	  src/simschlather.c, src/smith.c: Optimize memory allocation!

2012-05-22 12:35  mathieu_ribatet

	* R/conditionalSim.R: ## Lines starting with '## ' will be removed
	  from the log message.
	  ## File(s) to commit recursively:
	  ## R/conditionalSim.R
	  Fix a small bug.

2012-05-22 12:24  mathieu_ribatet

	* R/conditionalSim.R: Fix a small bug.

2012-05-22 11:59  mathieu_ribatet

	* src/simBrownResnick.c: Minor change

2012-05-22 11:59  mathieu_ribatet

	* R/simmaxstab.R, src/header.h, src/simextremalt.c: Use the
	  spectral characterization for the extremal-t process! Thanks
	  Thomas!!!

2012-05-04 13:32  mathieu_ribatet

	* tests/gradientPllik.R: Some minor improvements

2012-05-04 13:32  mathieu_ribatet

	* src/standardErrors.c: Fix some small bug

2012-05-04 13:31  mathieu_ribatet

	* src/direct.c: Improve lisibility of code

2012-05-04 13:31  mathieu_ribatet

	* src/simextremalt.c, src/simgeometric.c, src/simschlather.c,
	  src/simsmith.c: Improve lisibility of code

2012-05-04 13:26  mathieu_ribatet

	* man/SpatialExtremes-package.Rd, man/covariance.Rd,
	  man/fitmaxstab.Rd: Update the documentations

2012-05-04 13:25  mathieu_ribatet

	* R/predict.R: Standard error for quantiles are now implemented if
	  possible...

2012-05-04 13:25  mathieu_ribatet

	* R/conditionalSim.R, R/covariance.R: Minor modifications

2012-05-04 13:19  mathieu_ribatet

	* vignettes, vignettes/Figures, vignettes/SpatialExtremesGuide.Rnw,
	  vignettes/layout.sty, vignettes/references.bib: Move the vignette
	  files to the ./vignettes folder

2012-05-04 13:17  mathieu_ribatet

	* inst: Move the vignettes files to ./vignettes instead of
	  ./inst/doc

2012-05-04 13:16  mathieu_ribatet

	* inst/doc/layout.sty, inst/doc/references.bib: Move the vignettes
	  files to ./vignettes instead of ./inst/doc

2012-05-04 13:16  mathieu_ribatet

	* inst/doc/Figures/Schlather2Sim.png,
	  inst/doc/Figures/Smith2Sim.png,
	  inst/doc/Figures/rmaxstabSmith.png, inst/doc/Figures/tbm.png,
	  inst/doc/SpatialExtremesGuide.Rnw: Move the vignettes files to
	  ./vignettes instead of ./inst/doc

2012-05-04 13:12  mathieu_ribatet

	* NAMESPACE: Add a namespace as required by new releases of R

2012-05-04 10:29  mathieu_ribatet

	* R/plots.R: typo widths instead of width in layout

2012-05-04 10:22  mathieu_ribatet

	* R/plots.R: Some small modifications with the map and condmap
	  functions.

2012-05-02 04:57  mathieu_ribatet

	* src/latentVariable.c: Fix a typo

2012-04-23 11:11  mathieu_ribatet

	* R/conditionalSim.R: Minor change

2012-04-23 11:10  mathieu_ribatet

	* R/brownresnick.R, R/extremalt.R, R/fitmaxstable.R, R/geomgauss.R,
	  R/schlather.R, R/schlatherind.R, R/smith.R: Add an argument
	  check.grad to compare the numerical gradient and the
	  theoretical one. Only useful for debugging purposes.

2012-04-23 11:04  mathieu_ribatet

	* src/latentVariable.c: Fix a bug: going out of bound for the
	  acceptance and external rates...

2011-11-17 22:52  mathieu_ribatet

	* src/simBrownResnick.c: Improve the Brown--Resnick simulation. A
	  new method will appear soon!

2011-07-06 13:52  mathieu_ribatet

	* src/simschlather.c: Remove an unused C variable, i.e., zero.

2011-07-06 13:52  mathieu_ribatet

	* DESCRIPTION: Update the release number for the development
	  version

2011-07-06 13:51  mathieu_ribatet

	* tests/gradientPllik.R: Test if the analytical gradient of the
	  pairwise likelihood matches the
	  numerical one

2011-07-06 13:51  mathieu_ribatet

	* tests: Add a new folder tests in the package skeleton to
	  implement tests

2011-07-06 13:50  mathieu_ribatet

	* R/brownresnick.R, R/extremalt.R, R/fitmaxstable.R, R/geomgauss.R,
	  R/schlather.R, R/schlatherind.R, R/smith.R, R/starting.values.R:
	  Add a component check.grad in control to check if the analytical
	  gradient matches the numerical one. This is used in the new
	  folder
	  tests!

2011-07-04 12:57  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Some problem with the
	  producing of the vignette when saving png
	  figures in /inst/doc/Figures. Keep the figures fixed!

2011-07-04 09:27  mathieu_ribatet

	* ChangeLog, DESCRIPTION, NEWS: Update DESCRIPTION, ChangeLog and
	  NEWS for the new release.

2011-07-04 09:19  mathieu_ribatet

	* src/nsgeomgauss.c: Remove nsgeomgauss as I don't plan to work on
	  it now

2011-07-04 09:19  mathieu_ribatet

	* R/conditionalSim.R, R/copula.R, R/covariance.R, R/extremalt.R,
	  R/fitcovmat.R, R/geomgauss.R, R/kriging.R, R/methods.R,
	  R/modelChecking.R, R/plots.R, R/schlather.R, R/schlatherind.R,
	  R/simmaxstab.R, R/standardErrors.R, R/starting.values.R,
	  inst/doc/SpatialExtremesGuide.Rnw, man/TIC.Rd, man/condmap.Rd,
	  man/condrgp.Rd, man/covariance.Rd, man/extcoeff.Rd,
	  man/fitcopula.Rd, man/fitcovariance.Rd, man/fitmaxstab.Rd,
	  man/fitspatgev.Rd, man/fmadogram.Rd, man/lmadogram.Rd,
	  man/logLik.maxstab.Rd, man/madogram.Rd, man/map.Rd,
	  man/plot.copula.Rd, man/plot.maxstab.Rd, man/predict.copula.Rd,
	  man/predict.maxstab.Rd, man/predict.spatgev.Rd,
	  man/print.copula.Rd, man/print.maxstab.Rd, man/print.spatgev.Rd,
	  man/profile2d.maxstab.Rd, man/simmaxstab.Rd, src/brownResnick.c,
	  src/circulant.c, src/copula.c, src/covariance.c, src/direct.c,
	  src/extremalt.c, src/fitcovmat.c, src/geomgauss.c, src/header.h,
	  src/kriging.c, src/latentVariable.c, src/schlather.c,
	  src/schlatherind.c, src/simextremalt.c, src/simgeometric.c,
	  src/simschlather.c, src/smith.c, src/smith3d.c,
	  src/standardErrors.c, src/turningbands.c, src/utils.c: Rename
	  what was call "sill" to "nugget", i.e., nugget = 1 - sill, as
	  it might confuse the users

2011-07-04 09:17  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.pdf: Remove the pdf vignette from
	  the svn repos

2011-06-23 16:07  mathieu_ribatet

	* src/simschlather.c: Small improvement

2011-06-23 16:07  mathieu_ribatet

	* src/maxLinear.c: Get the code looking nicer

2011-06-23 16:06  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw,
	  inst/doc/SpatialExtremesGuide.pdf, inst/doc/layout.sty: Ensure
	  that the utf8 encoding will be recognize by R CMD check.
	  Reduce the size of the vignette by using utils::compactPDF

2011-06-23 16:06  mathieu_ribatet

	* R/copula.R, R/methods.R, R/modelChecking.R, R/predict.R,
	  man/fitcopula.Rd, man/plot.copula.Rd, man/predict.copula.Rd,
	  man/rcopula.Rd, src/copula.c, src/header.h: Fix a bug in
	  computing the likelihood for the Student copula.
	  A new function to get realisations from copula based models is
	  now
	  implemented.
	  Prediction and model checking is also available.

2011-04-22 20:33  mathieu_ribatet

	* src/Makevars, src/covariance.c, src/fitcovmat.c, src/header.h,
	  src/pairwiselik.c, src/utils.c: Now use openmp and small
	  optimizations

2011-04-22 20:32  mathieu_ribatet

	* R/madogram.R: Fix a bug when using a too large number of bins

2011-03-22 13:23  mathieu_ribatet

	* ChangeLog: Update the ChangeLog

2011-03-22 13:21  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.pdf: Use png figures to reduce
	  vignette size

2011-03-22 13:21  mathieu_ribatet

	* R/conditionalSim.R, man/SpatialExtremes-package.Rd,
	  man/condrmaxlin.Rd, man/rmaxlin.Rd: condrmaxstab is renamed as
	  condrmaxlin

2011-03-22 08:38  mathieu_ribatet

	* man/condrmaxlin.Rd: Remove condrmaxstab now named as condrmaxlin

2011-03-22 08:37  mathieu_ribatet

	* man/condrmaxstab.Rd: Remove condrmaxstab now named as condrmaxlin

2011-03-22 08:34  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw,
	  inst/doc/SpatialExtremesGuide.pdf: Use png figures to reduce
	  vignette size

2011-03-22 08:34  mathieu_ribatet

	* inst/doc/Figures/Schlather2Sim.png,
	  inst/doc/Figures/Smith2Sim.png,
	  inst/doc/Figures/rmaxstabSmith.png, inst/doc/Figures/tbm.png: Add
	  png figures to reduce vignette size

2011-03-22 08:33  mathieu_ribatet

	* inst/doc/Figures: Add png figures to reduce vignette size

2011-03-17 08:19  mathieu_ribatet

	* inst/doc, inst/doc/SpatialExtremesGuide.pdf: The pdf file
	  produced by the vignette was too large so I will reduce
	  its size manually.

2011-03-16 13:02  mathieu_ribatet

	* NEWS: Update the NEWS file

2011-03-16 13:01  mathieu_ribatet

	* ChangeLog: Update the ChangeLog

2011-03-16 12:59  mathieu_ribatet

	* R/conditionalSim.R: Small improvements for the conditional
	  simulation of max-stable
	  processes

2011-03-16 12:59  mathieu_ribatet

	* R/maxLinear.R, man/rmaxlin.Rd: Implementation of max-linear
	  models

2011-03-16 12:58  mathieu_ribatet

	* man/DIC.Rd, man/GEV.Rd, man/GPD.Rd,
	  man/SpatialExtremes-package.Rd, man/condmap.Rd,
	  man/condrmaxstab.Rd, man/covariance.Rd, man/cv.Rd,
	  man/fitcopula.Rd, man/fitmaxstab.Rd, man/fitspatgev.Rd,
	  man/fmadogram.Rd, man/gcv.Rd, man/latentVariable.Rd,
	  man/madogram.Rd, man/map.Rd, man/map.latent.Rd, man/rbpspline.Rd,
	  man/simmaxstab.Rd: Updating the Rd documentation

2011-03-16 08:34  mathieu_ribatet

	* src/header.h, src/maxLinear.c: Some minor modification for the
	  conditional sampling from max-linear
	  models

2011-03-13 15:00  mathieu_ribatet

	* src/circulant.c, src/simextremalt.c, src/simgeometric.c,
	  src/simschlather.c: Replace the use of pythag by hypot for
	  compatibility with R 2.14-0
	  (email of Prof. Brian Ripley)

2011-03-11 15:40  mathieu_ribatet

	* R/conditionalSim.R, man/condrmaxstab.Rd: Set p = 10000 for the
	  conditional max-linear sampling.

2011-03-11 14:55  mathieu_ribatet

	* man/condrmaxstab.Rd: The discretized Smith model was badly
	  defined in the doc.

2011-03-11 13:20  mathieu_ribatet

	* ChangeLog, DESCRIPTION, NEWS: Prepare the 1.8-0 release!

2011-03-11 13:14  mathieu_ribatet

	* man/logLik.maxstab.Rd: Fix a typo.

2011-03-11 13:14  mathieu_ribatet

	* man/condrgp.Rd: Fix a typo.

2011-03-11 13:13  mathieu_ribatet

	* R/conditionalSim.R, man/condrmaxstab.Rd, src/header.h,
	  src/maxLinear.c: Add (approximate) conditional simulation of unit
	  Frechet random fields
	  from unit Frechet max-linear processes

2011-03-03 15:52  mathieu_ribatet

	* src/simBrownResnick.c: Small improvement for the simulation of
	  Brown--Resnick processes

2011-03-03 15:52  mathieu_ribatet

	* src/kriging.c, src/latentVariable.c: Remove unused variables

2011-03-03 15:51  mathieu_ribatet

	* src/copula.c: Copulas are now fully implemented

2011-03-03 15:51  mathieu_ribatet

	* R/copula.R, R/methods.R, man/fitcopula.Rd, man/logLik.maxstab.Rd,
	  man/print.copula.Rd: Copulas are now fully implemented

2011-01-18 15:28  mathieu_ribatet

	* R/modelChecking.R: Fix a bug with the isotropic Smith model

2011-01-11 16:37  mathieu_ribatet

	* R/copula.R: Fix a small typo.

2011-01-11 16:37  mathieu_ribatet

	* R/brownresnick.R, R/extremalt.R, R/geomgauss.R, R/schlather.R,
	  R/schlatherind.R: Add a component iso to the output of the
	  fitmaxstab function to
	  specify if the model is isotropic.

2011-01-04 16:18  mathieu_ribatet

	* R/latentVariable.R, man/latentVariable.Rd, src/latentVariable.c:
	  Improve the latent variable approach

2011-01-04 16:18  mathieu_ribatet

	* src/copula.c: Add the simple copula approach

2011-01-04 16:17  mathieu_ribatet

	* R/copula.R, R/methods.R, R/plots.R, man/map.latent.Rd,
	  src/header.h, src/utils.c: Add the simple copula approach

2011-01-04 16:15  mathieu_ribatet

	* R/standardErrors.R: Fix a small bug when using isotropic Smith
	  model and doing model selection

2011-01-04 16:14  mathieu_ribatet

	* R/selection.R: Fix a small bug when using isotropic Smith model
	  and doing model selection

2010-11-08 09:24  mathieu_ribatet

	* R/plots.R: Add a function that plot predictive pointwise return
	  level from an
	  object of class "latent". Some works need to be done as it is
	  pretty
	  slow still.

2010-11-08 09:23  mathieu_ribatet

	* R/conditionalSim.R: Small improvements for conditional
	  simulations --- still slow

2010-11-08 09:22  mathieu_ribatet

	* src/latentVariable.c: Some optimization for the MCMC sampler

2010-11-05 18:47  mathieu_ribatet

	* src/header.h: Add simple kriging and conditional simulations of
	  Gaussian processes

2010-11-05 18:46  mathieu_ribatet

	* R/latentVariable.R, src/latentVariable.c: Optimize the MCMC
	  sampler --- no inversion ;-)

2010-11-05 18:46  mathieu_ribatet

	* R/conditionalSim.R, R/kriging.R, man/condrgp.Rd, man/kriging.Rd,
	  src/kriging.c: Add simple kriging and conditional simulations of
	  Gaussian processes

2010-10-29 08:56  mathieu_ribatet

	* ChangeLog, DESCRIPTION, NEWS: Update the ChangeLog, NEWS and
	  DESCRIPTION files for the new release!

2010-10-29 08:50  mathieu_ribatet

	* man/DIC.Rd, man/fitmaxstab.Rd, man/gev2frech.Rd,
	  man/latentVariable.Rd: Fix some typos in the documentation

2010-10-29 08:25  mathieu_ribatet

	* R/latentVariable.R, R/methods.R, man/DIC.Rd,
	  man/SpatialExtremes-package.Rd, man/latentVariable.Rd,
	  man/print.latent.Rd, src/latentVariable.c: Refine code and
	  documentation for the latent variable approach

2010-10-27 16:12  mathieu_ribatet

	* R/latentVariable.R, R/methods.R, man/DIC.Rd,
	  man/latentVariable.Rd, src/header.h, src/univllik.c: Add function
	  related to the latent variable approach

2010-10-27 16:11  mathieu_ribatet

	* src/latentVariable.c: Add function related to the latent variable
	  approach

2010-09-21 11:26  mathieu_ribatet

	* DESCRIPTION, NEWS: Update contact info as I'm now in Montpellier!

2010-09-21 11:08  mathieu_ribatet

	* src/simextremalt.c: Small optimization for the simulation of
	  extremal t processes

2010-09-21 11:08  mathieu_ribatet

	* src/simBrownResnick.c: Fix a bug in the simulation of
	  Brown-Resnick processes

2010-08-29 13:38  mathieu_ribatet

	* R/simmaxstab.R: Fix a bug: simulation from the brown-resnick,
	  geometric and extremal t
	  were not possible.

2010-08-13 07:45  mathieu_ribatet

	* ChangeLog, DESCRIPTION, NEWS: Update news, changelog and
	  description for release 1.6-0!

2010-08-12 14:59  mathieu_ribatet

	* man/SpatialExtremes-package.Rd, man/SpatialExtremes.Rd: Rename
	  SpatialExtremes.Rd to SpatialExtremes-package.Rd for new R usage

2010-08-12 14:58  mathieu_ribatet

	* man/SpatialExtremes.Rd, man/rainfall.Rd, man/swiss.Rd,
	  man/swissalt.Rd: Some data sets were not documented.

2010-08-12 14:57  mathieu_ribatet

	* R/fitcovmat.R: Refining the starting values

2010-08-12 09:04  mathieu_ribatet

	* man/fitmaxstab.Rd: Update bibliography for fitmaxstab and explain
	  how to use the
	  geometric Gaussian and extremal t models.

2010-08-12 08:02  mathieu_ribatet

	* R/utils.R: Add an internal function to get the regression
	  coefficients (trend surfaces) from the R formula.

2010-08-12 08:00  mathieu_ribatet

	* src/brownResnick.c, src/extremalt.c, src/geomgauss.c,
	  src/schlather.c, src/schlatherind.c, src/smith.c, src/smith3d.c:
	  Fix a bug in checking if temporal covariates were used:
	  usetempcov[3] was called while usetempcov has length 3. No
	  comment!

2010-08-11 13:06  mathieu_ribatet

	* src/weightedPairwiselik.c: Optimize the computation of the
	  weighted pairwise likelihood

2010-08-11 13:05  mathieu_ribatet

	* R/utils.R: Add a small utility function to check wether a
	  log-link function is
	  used for the trend surfaces

2010-08-11 13:05  mathieu_ribatet

	* R/brownresnick.R, R/extremalt.R, R/geomgauss.R, R/methods.R,
	  R/schlather.R, R/schlatherind.R, R/smith.R: The summary of class
	  maxstab now depicts if weighted composite likelihood were used.

2010-08-11 11:54  mathieu_ribatet

	* R/modelChecking.R: Reset default setting for par before quitting
	  plot.maxstab

2010-08-11 10:09  mathieu_ribatet

	* src/weightedStandardErrors.c: Combined the computation of the
	  standard errors for the weighted and
	  unweighted cases

2010-08-11 10:09  mathieu_ribatet

	* R/standardErrors.R, src/header.h, src/standardErrors.c,
	  src/standardErrorsCommonPart.c: Combined the computation of the
	  standard errors for the weighted and
	  unweighted cases

2010-08-11 09:00  mathieu_ribatet

	* src/simBrownResnick.c, src/simgeometric.c, src/simschlather.c:
	  Removed unnecessary duplicated code (grid is either TRUE or
	  FALSE)

2010-08-11 09:00  mathieu_ribatet

	* src/header.h, src/simextremalt.c: Add the simulation of the
	  extremal t model

2010-08-11 08:59  mathieu_ribatet

	* src/fitcovmat.c: Minor change

2010-08-11 08:59  mathieu_ribatet

	* man/internals.Rd: Add the simulation of the extremal t model

2010-08-11 08:59  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw, man/fmadogram.Rd,
	  man/madogram.Rd, man/rgp.Rd, man/simmaxstab.Rd, man/variogram.Rd:
	  Changes due to the modification in the madograms like functions
	  and
	  in rgp and rmaxstab

2010-08-11 08:58  mathieu_ribatet

	* R/simgaussproc.R, R/simmaxstab.R: If grid is TRUE and only one
	  realization is generated we don't return
	  an array but a matrix --- easing the call to image

2010-08-11 08:57  mathieu_ribatet

	* R/madogram.R: The xlim argument can now be passed to the madogram
	  like functions

2010-08-10 08:21  mathieu_ribatet

	* src: Ignoring the TAGS file

2010-08-10 08:21  mathieu_ribatet

	* inst/doc: Ignoring the auto folder

2010-08-10 08:20  mathieu_ribatet

	* R/extremalt.R, R/geomgauss.R, R/schlather.R, R/schlatherind.R,
	  src/standardErrors.c: Std. err. for the Bessel family w.r.t. the
	  smooth parameter are now available --- through finite
	  differences.

2010-08-09 22:07  mathieu_ribatet

	* man/rainfall.Rd: The unit was wrong for the rainfall data set.

2010-08-09 22:01  mathieu_ribatet

	* src/schlatherind.c: Avoid some numerical problems for the
	  pairwise likelihood and the
	  independent Schlather process. Need to be refined though.

2010-08-09 22:00  mathieu_ribatet

	* R/extremalt.R, R/geomgauss.R, R/schlather.R, R/schlatherind.R,
	  R/smith.R: Standard errors are now available when using the
	  Whittle-Matern family.

2010-08-09 15:01  mathieu_ribatet

	* src/standardErrors.c: We now use finite differencies for the
	  Whittle-Matern corr. family to get std. err. for the "smooth"
	  parameter. Std. err. for the extremal t model are now correct.

2010-07-29 13:05  mathieu_ribatet

	* R/extremalt.R, R/methods.R, src/covariance.c, src/extremalt.c,
	  src/fitcovmat.c, src/header.h, src/pairwiselik.c,
	  src/standardErrors.c, src/standardErrorsCommonPart.c: The
	  extremal t process is now implemented. However there's still a
	  problem with the analytical gradient w.r.t. the DoF parameter.

2010-07-26 13:11  mathieu_ribatet

	* src/header.h, src/standardErrors.c: First implementation of the
	  extremal t process. Still buggy!

2010-07-26 13:04  mathieu_ribatet

	* R/extremalt.R, R/fitcovmat.R, R/fitmaxstable.R,
	  R/standardErrors.R, R/starting.values.R, src/covariance.c,
	  src/extremalt.c, src/fitcovmat.c, src/header.h,
	  src/pairwiselik.c, src/simBrownResnick.c, src/standardErrors.c,
	  src/utils.c, src/weightedPairwiselik.c: First implementation of
	  the extremal t process. Still buggy!

2010-07-20 10:12  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Remove the dependence on the
	  RandomFields package

2010-07-19 14:41  mathieu_ribatet

	* ChangeLog, DESCRIPTION, NEWS: Version 1.6-0 of the package

2010-07-19 14:41  mathieu_ribatet

	* src/simBrownResnick.c: Chagne the stopping rule for B.-R.
	  simulation. Not perfect though!

2010-07-19 14:40  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: The RandomField package is not
	  required anymore

2010-07-14 13:34  mathieu_ribatet

	* src/simgeometric.c: A small optimisation for simulating Geometric
	  processes

2010-07-14 13:32  mathieu_ribatet

	* src/standardErrors.c: Fix a stupid bug. The determinant in the
	  Smith model was incidentally set to the const int type!

2010-07-08 10:29  mathieu_ribatet

	* R/modelChecking.R: Allow for the simulation of Brown--Resnick
	  processes. *NOT TO BE
	  CONSIDERED AS ACCURATE*

2010-07-08 10:29  mathieu_ribatet

	* src/simBrownResnick.c: Allow for the simulation of Brown--Resnick
	  processes. *NOT TO BE
	  CONSIDERED AS ACCURATE*

2010-07-08 10:28  mathieu_ribatet

	* src/direct.c: Allow for the simulation of Brown--Resnick
	  processes. *NOT TO BE
	  CONSIDERED AS ACCURATE*

2010-07-08 10:27  mathieu_ribatet

	* src/covariance.c: Minor changes

2010-07-08 10:27  mathieu_ribatet

	* src/simsmith.c: More accurate approximation for the simulation of
	  the Smith process

2010-07-08 10:26  mathieu_ribatet

	* src/simgeometric.c: Optimize the simulation of geometric
	  processes (through Gumbel margins first)

2010-07-08 10:25  mathieu_ribatet

	* src/pairwiselik.c: Optimize the evaluations of various pairwise
	  likelihoods

2010-04-23 12:35  mathieu_ribatet

	* src/turningbands.c: gamma isn't defined must use gammafn!!!

2010-04-23 12:33  mathieu_ribatet

	* src/header.h: Updating the header files

2010-04-23 12:33  mathieu_ribatet

	* src/fitcovmat.c: The covariance now allow sill to be greater than
	  1 so we need to
	  penalise it in fitcovmat.c

2010-04-23 12:32  mathieu_ribatet

	* src/covariance.c: Consistent parametrization of the Brown-Resnick
	  processes with the
	  documentation

2010-04-23 12:32  mathieu_ribatet

	* man/plot.maxstab.Rd: Small changes

2010-04-23 12:31  mathieu_ribatet

	* man/madogram.Rd: Angles should partition (0, pi)

2010-04-23 12:31  mathieu_ribatet

	* inst/doc/layout.sty: Minor change

2010-04-23 12:31  mathieu_ribatet

	* R/modelChecking.R: Fix a bug in plot.maxstab

2010-04-23 12:30  mathieu_ribatet

	* R/methods.R: Modifying the printing methods as temporal
	  covariates are available

2010-04-23 12:30  mathieu_ribatet

	* R/madogram.R: Add pretty ylim in the extremal coefficient
	  function

2010-04-23 12:29  mathieu_ribatet

	* R/fitcovmat.R: Consistent parametrization of the Brown-Resnick
	  processes with the
	  documentation

2010-04-23 12:29  mathieu_ribatet

	* src/simschlather.c: Cleaning simschlather

2010-04-23 12:28  mathieu_ribatet

	* src/utils.c: Utils function for the temporal trends

2010-04-23 12:28  mathieu_ribatet

	* src/standardErrorsCommonPart.c: Removing duplicate code in the
	  gradient and share it

2010-04-23 12:27  mathieu_ribatet

	* R/simmaxstab.R, src/simBrownResnick.c: Add simulation from
	  Brown-Resnick processes

2010-04-23 12:26  mathieu_ribatet

	* man/variogram.Rd: Add the empirical variogram

2010-04-23 12:24  mathieu_ribatet

	* R/brownresnick.R, R/fitmaxstable.R, R/geomgauss.R, R/schlather.R,
	  R/schlatherind.R, R/smith.R, R/spatgev.R, R/standardErrors.R,
	  man/fitmaxstab.Rd, man/fitspatgev.Rd, src/brownResnick.c,
	  src/geomgauss.c, src/schlather.c, src/schlatherind.c,
	  src/smith.c, src/smith3d.c, src/spatgevlik.c,
	  src/standardErrors.c: Allowing for temporal covariates

2010-03-16 09:21  mathieu_ribatet

	* src/header.h: Update the header file

2010-03-16 09:20  mathieu_ribatet

	* src/utils.c: Add a function that computes the distance from the
	  origin. It is
	  useful for the fractional brownian motion simulations

2010-03-16 09:20  mathieu_ribatet

	* src/turningbands.c: Fix a bug in the simulation of the powered
	  exponential correlation
	  function through the tbm

2010-03-16 09:19  mathieu_ribatet

	* src/simschlather.c: Fix a bug in the simulation of the powered
	  exponential correlation
	  function through the tbm

2010-03-16 09:19  mathieu_ribatet

	* src/madogram.c: Implementation of the empirical variogram

2010-03-16 09:18  mathieu_ribatet

	* src/covariance.c: Add the fractional brownian motion covariance

2010-03-16 09:18  mathieu_ribatet

	* src/circulant.c: Minor change

2010-03-16 09:17  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Minor change in R pieces of
	  code in the vignette

2010-03-16 09:16  mathieu_ribatet

	* R/simgaussproc.R: Add the simulation of fractional brownian
	  motions -- only the direct
	  and turning band method

2010-03-16 09:16  mathieu_ribatet

	* R/madogram.R: Add the empirical variogram

2010-02-11 16:44  mathieu_ribatet

	* src/header.h: Update the header file

2010-02-11 16:44  mathieu_ribatet

	* src/simgeometric.c, src/simschlather.c: The circulant embedding
	  method is now available

2010-02-11 16:43  mathieu_ribatet

	* src/circulant.c: Small optimizations of the circulant embedding
	  method

2010-02-11 16:42  mathieu_ribatet

	* man/rgp.Rd, man/simmaxstab.Rd: The circulant embedding method is
	  now available

2010-02-11 16:42  mathieu_ribatet

	* R/utils.R: Internal function to check if a grid is regular

2010-02-11 16:42  mathieu_ribatet

	* R/simgaussproc.R, R/simmaxstab.R: The circulant embedding method
	  is now available

2010-02-11 16:41  mathieu_ribatet

	* R/madogram.R: Set appropriate ranges for x and y axes

2010-02-11 16:39  mathieu_ribatet

	* R/modelChecking.R, man/plot.maxstab.Rd: Add a generic plot
	  function for class 'maxstab' that check the
	  goodness of fit of a fitted max-stable model

2010-02-08 22:04  mathieu_ribatet

	* src/simgeometric.c, src/simschlather.c, src/simsmith.c: Remove an
	  if test to speed up the code

2010-02-08 21:29  mathieu_ribatet

	* src/covariance.c, src/geomgauss.c, src/schlather.c,
	  src/schlatherind.c: The covariance functions are now available
	  when sill > 1 and hence
	  implies changes for the respective pairwise likelihoods

2010-02-08 21:27  mathieu_ribatet

	* R/simgaussproc.R: Add the circulant embedding method for GRF

2010-02-08 21:26  mathieu_ribatet

	* R/brownresnick.R, R/geomgauss.R, R/schlatherind.R: Refined tests
	  for the standard error computations

2010-02-08 20:26  mathieu_ribatet

	* R/circulant.R, src/circulant.c, src/header.h: Add the circulant
	  embedding method for GRF

2010-01-18 14:52  mathieu_ribatet

	* src/smith3d.c: Small optimization: use of memset

2010-01-18 14:50  mathieu_ribatet

	* src/brownResnick.c, src/fitcovmat.c, src/geomgauss.c,
	  src/pairwiselik.c, src/randomlines.c, src/schlather.c,
	  src/schlatherind.c, src/simschlather.c, src/simsmith.c,
	  src/smith.c, src/turningbands.c, src/utils.c: Small C
	  optimization: use of memset

2010-01-18 14:47  mathieu_ribatet

	* R/simgaussproc.R: Fix a bug: simulation on a line wasn't possible

2010-01-14 18:59  mathieu_ribatet

	* src/direct.c: It was impossible to simulate GP with variance
	  larger than one. Fixed!

2010-01-14 11:10  mathieu_ribatet

	* R/madogram.R: Now madogram and fmadogram can use marge = "model"
	  i.e. transform to
	  U(0,1) from the fitted trend surfaces of the max-stable model

2010-01-14 11:09  mathieu_ribatet

	* ChangeLog, DESCRIPTION, NEWS: Update ChangeLog, DESCRIPTION and
	  NEWS files

2010-01-14 10:48  mathieu_ribatet

	* src/standardErrors.c: Fix a bug in the geomgaussstderr (marginal
	  part)

2010-01-14 10:47  mathieu_ribatet

	* src/madogram.c, src/utils.c, src/weightedStandardErrors.c: Slight
	  optimizations of the C code

2010-01-13 22:40  mathieu_ribatet

	* src/standardErrors.c: Fix a bug in the computation of standard
	  errors for geomgauss

2010-01-13 22:39  mathieu_ribatet

	* man/condmap.Rd, man/map.Rd: Minor typo in the documentation of
	  map and condmap

2010-01-13 22:38  mathieu_ribatet

	* R/utils.R: gev2frech uses the rank instead of ppoints for the
	  empirical
	  distribution - better for the F-madogram

2010-01-13 22:37  mathieu_ribatet

	* data/rainfall.RData, data/swissalt.RData: Add data sets and
	  function to plot a map of Switzerland

2010-01-13 22:36  mathieu_ribatet

	* R/swiss.R, data, man/rainfall.Rd, man/swiss.Rd, man/swissalt.Rd:
	  Add data sets and function to plot a map of Switzerland

2010-01-13 22:35  mathieu_ribatet

	* R/standardErrors.R: Forgot to put the names gradient in the std
	  err computations

2010-01-13 22:34  mathieu_ribatet

	* R/plots.R: Remove the dots argument in uniroot in condmap

2010-01-13 22:33  mathieu_ribatet

	* R/fitcovmat.R: Define new values for the Brown-Resnick processes

2010-01-06 15:10  mathieu_ribatet

	* R/standardErrors.R: Now we use 'crossprod' which is faster when
	  std.err.type = 'grad'

2009-12-29 17:40  mathieu_ribatet

	* NEWS: Use the standard given by R for the NEWS file

2009-12-29 17:10  mathieu_ribatet

	* NEWS: Add a NEWS file

2009-12-29 16:51  mathieu_ribatet

	* DESCRIPTION: Update

2009-12-29 16:51  mathieu_ribatet

	* ChangeLog: Update the ChangeLog

2009-12-29 16:37  mathieu_ribatet

	* man/condmap.Rd: Fix a typo

2009-12-29 16:21  mathieu_ribatet

	* inst/doc/Figures: Remove the Figures folder - useless

2009-12-29 16:19  mathieu_ribatet

	* man/condmap.Rd: The example is now excuted and nicer

2009-12-29 16:00  mathieu_ribatet

	* R/utils.R: Add an invisible frech2gev function which is faster
	  but less flexible

2009-12-29 15:59  mathieu_ribatet

	* R/plots.R, man/condmap.Rd, man/map.Rd: map and condmap can now
	  deal with covariates through the 'covariates'
	  argument

2009-12-29 15:57  mathieu_ribatet

	* src/standardErrors.c: Some code optimizations

2009-12-29 15:56  mathieu_ribatet

	* R/brownresnick.R, R/fitmaxstable.R, R/geomgauss.R, R/schlather.R,
	  R/schlatherind.R, R/smith.R, R/standardErrors.R,
	  man/fitmaxstab.Rd, src/brownResnick.c, src/geomgauss.c,
	  src/header.h, src/schlather.c, src/schlatherind.c, src/smith.c,
	  src/smith3d.c, src/weightedPairwiselik.c,
	  src/weightedStandardErrors.c: Allow the use of weights in the
	  pairwise likelihood

2009-12-17 11:03  mathieu_ribatet

	* man/covariance.Rd, man/extcoeff.Rd, man/fmadogram.Rd,
	  man/madogram.Rd, man/qqextcoeff.Rd, man/rgp.Rd,
	  man/simmaxstab.Rd: Improve the examples

2009-12-17 11:03  mathieu_ribatet

	* R/plots.R: Improve how the x and y axis limits are computed

2009-12-17 10:24  mathieu_ribatet

	* R/predict.R, man/predict.maxstab.Rd: Add an option "std.err" to
	  compute or/not the standard errors

2009-12-17 10:23  mathieu_ribatet

	* R/plots.R, man/map.Rd: Rewrite the map function to allow the use
	  of covariates if necessary

2009-12-16 19:54  mathieu_ribatet

	* R/methods.R: Add the display of the TIC for object of class
	  spatgev

2009-12-16 19:53  mathieu_ribatet

	* R/fitmaxstable.R: Comment fitnsmaxstab - not time to implement it

2009-12-16 19:53  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Remove rgl

2009-12-16 19:51  mathieu_ribatet

	* src/standardErrors.c: Removing an unused declared variable

2009-12-16 11:02  mathieu_ribatet

	* R/starting.values.R: No warning message if fitspatgev failed to
	  converge

2009-12-16 11:00  mathieu_ribatet

	* R/nsgeomgauss.R: Move nsgeomgauss.R to the development folder -
	  no implementation
	  planned

2009-12-16 10:27  mathieu_ribatet

	* src/header.h: All the (unecessary) gradient functions were
	  removed

2009-12-16 10:26  mathieu_ribatet

	* man/fitspatgev.Rd: The fitspatgev function has now a "corr"
	  argument to be consistent
	  with the fitmaxstab function.

2009-12-16 10:25  mathieu_ribatet

	* src/standardErrors.c: Improving the code

2009-12-16 10:24  mathieu_ribatet

	* R/madogram.R, man/fmadogram.Rd, man/lmadogram.Rd,
	  man/madogram.Rd: Remove the use of the rgl package (warnings when
	  building the package)
	  and passing marge = "emp" as the default

2009-12-16 10:24  mathieu_ribatet

	* R/standardErrors.R: Improve the way how the asymptotic covariance
	  matrices are computed

2009-12-16 10:22  mathieu_ribatet

	* R/brownresnick.R, R/geomgauss.R, R/schlather.R, R/schlatherind.R,
	  R/selection.R, R/smith.R, R/spatgev.R: What I previously called
	  jacobian was misleading and now I used
	  var.score standing for "variance of the (composite) score"

2009-12-16 10:20  mathieu_ribatet

	* R/gradients.R, src/gradients.c: Removing the gradient files: now
	  useless because of standardErrors
	  files

2009-12-15 22:46  mathieu_ribatet

	* ChangeLog: Update the ChangLog

2009-12-15 22:39  mathieu_ribatet

	* DESCRIPTION: Update the version number

2009-12-15 22:36  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Small editing in view of a new
	  release

2009-12-15 22:31  mathieu_ribatet

	* R/gradients.R, R/standardErrors.R: Fix a typo

2009-12-15 22:28  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Forgot that by default
	  lmadogram uses an rgl output

2009-12-15 22:27  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Revert to a former version and
	  reduce the grid sizes to get less heavy
	  pdf output

2009-12-15 22:23  mathieu_ribatet

	* inst/doc/references.bib: Update ref

2009-12-15 22:22  mathieu_ribatet

	* src/header.h: New way to compute the asymptotic covariance matrix
	  - header

2009-12-15 22:09  mathieu_ribatet

	* src/gradients.c: Fix a bug in smith3d

2009-12-15 22:07  mathieu_ribatet

	* R/brownresnick.R, R/geomgauss.R, R/schlather.R, R/schlatherind.R,
	  R/smith.R, R/standardErrors.R, src/standardErrors.c: New way to
	  compute the asymptotic covariance matrix

2009-12-15 16:21  mathieu_ribatet

	* R/fitcovmat.R: Use marge = "emp" by defaults - faster

2009-12-15 16:21  mathieu_ribatet

	* R/gradients.R: Small improvements

2009-12-15 16:20  mathieu_ribatet

	* R/methods.R: Changes the methods as now Brown-Resnick process are
	  available

2009-12-15 16:19  mathieu_ribatet

	* src/header.h: Changes the headers because of new functions

2009-12-15 16:19  mathieu_ribatet

	* src/schlather.c, src/schlatherind.c: Add the generalized Cauchy
	  correlation function

2009-12-15 16:18  mathieu_ribatet

	* src/nsgeomgauss.c: Add the generalized Cauchy correlation
	  function

2009-12-15 16:18  mathieu_ribatet

	* src/geomgauss.c: Add the generalized Cauchy correlation function

2009-12-15 16:18  mathieu_ribatet

	* src/fitcovmat.c: Add the generalized Cauchy correlation function
	  and Brown-Resnick
	  processes

2009-12-15 16:17  mathieu_ribatet

	* src/covariance.c: Add the generalized Cauchy correlation function
	  and Brown-Resnick
	  processes

2009-12-15 16:17  mathieu_ribatet

	* man/lsmaxstab.Rd: This is a wrapper to the fitcovmat and
	  fitcovariance function - to be
	  consistent with the fitmaxstab function. "ls" stands for least
	  squares.

2009-12-15 16:16  mathieu_ribatet

	* man/internals.Rd: Add the Brown-Resnick processes

2009-12-15 16:16  mathieu_ribatet

	* man/fitmaxstab.Rd: Add the generalized Cauchy correlation
	  function and Brown-Resnick
	  processes

2009-12-15 16:15  mathieu_ribatet

	* man/fitcovariance.Rd, man/fitcovmat.Rd: Use marge = "emp" by
	  default and allow for non weighted least squares

2009-12-15 16:14  mathieu_ribatet

	* man/covariance.Rd: Add the generalized Cauchy correlation
	  function

2009-12-15 16:14  mathieu_ribatet

	* man/TIC.Rd: Add the composite version of the BIC

2009-12-15 16:13  mathieu_ribatet

	* R/starting.values.R: Add the generalized Cauchy correlation
	  function and the computations
	  of starting values for Brown-Resnick processes

2009-12-15 16:13  mathieu_ribatet

	* R/selection.R: Add the composite version of the BIC and remove
	  duplicated code

2009-12-15 16:12  mathieu_ribatet

	* R/geomgauss.R, R/schlather.R, R/schlatherind.R: Add the
	  generalized Cauchy correlation function

2009-12-15 16:11  mathieu_ribatet

	* R/predict.R: Get standard errors for the predicted values if
	  possible

2009-12-15 16:10  mathieu_ribatet

	* R/extcoeff.R, R/fitmaxstable.R, R/madogram.R: Now it works
	  without any problem for one dimensional index set

2009-12-15 16:09  mathieu_ribatet

	* R/covariance.R: Add the generalized cauchy covariance function

2009-12-15 16:08  mathieu_ribatet

	* R/brownresnick.R, src/brownResnick.c, src/gradients.c: Add the
	  brown-resnick processes

2009-10-31 10:46  mathieu_ribatet

	* src/simgeometric.c, src/simschlather.c: Fix a bug when simulating
	  the process on a grid: wrong iwork size

2009-10-31 10:46  mathieu_ribatet

	* src/simsmith.c: Fix a bug when simulating the process on a grid

2009-10-31 10:44  mathieu_ribatet

	* man/covariance.Rd: Fix typos in the doc

2009-10-16 08:42  mathieu_ribatet

	* ChangeLog, DESCRIPTION: Update the version and ChangeLog

2009-10-16 08:37  mathieu_ribatet

	* src/pairwiselik.c, src/simschlather.c: Remove the inline
	  attribute - not portable

2009-10-12 06:18  mathieu_ribatet

	* src/turningbands.c: Minor change

2009-10-12 06:17  mathieu_ribatet

	* src/pairwiselik.c: Pass the R_InLine function to the lplik???
	  function. When the
	  bivariate distribution is numerically degenerates, then it now
	  returns
	  MINf instead of the computation of the univariate llik.

2009-10-12 06:14  mathieu_ribatet

	* src/header.h: Minor change

2009-10-12 06:14  mathieu_ribatet

	* src/covariance.c: Improvements in the variable definitions

2009-10-12 06:12  mathieu_ribatet

	* man/madogram.Rd, man/predict.maxstab.Rd, man/predict.pspline.Rd,
	  man/predict.spatgev.Rd, man/print.maxstab.Rd,
	  man/print.pspline.Rd, man/print.spatgev.Rd, man/simmaxstab.Rd:
	  Minor changes to the documention because of complaints of the new
	  Rd
	  parser

2009-10-12 06:11  mathieu_ribatet

	* inst/doc/references.bib: Update the references

2009-08-24 12:32  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Some small editing

2009-08-24 12:31  mathieu_ribatet

	* src/header.h, src/simgeometric.c, src/simschlather.c,
	  src/turningbands.c: The argument control is now added to control
	  several tuning parameters
	  for the simulation algo hence the prototype for the C functions
	  are
	  updated

2009-08-24 12:29  mathieu_ribatet

	* man/SpatialExtremes.Rd: Add the entry for the simulation of
	  random fields

2009-08-24 12:29  mathieu_ribatet

	* R/simgaussproc.R, R/simmaxstab.R, man/rgp.Rd, man/simmaxstab.Rd:
	  The argument control is now added to control several tuning
	  parameters
	  for the simulation algo

2009-08-24 12:25  mathieu_ribatet

	* R/covariance.R: If dist is a matrix it now returns a matrix too

2009-07-08 13:19  mathieu_ribatet

	* src/header.h: Add the simulation of the geometric gaussian
	  process

2009-07-08 13:19  mathieu_ribatet

	* src/gradients.c: Fix a bug in the computation of the gradient -
	  e.g. gwhitmat

2009-07-08 13:19  mathieu_ribatet

	* R/starting.values.R: Fix a problem when using nlm with the Smith
	  model

2009-07-08 13:18  mathieu_ribatet

	* R/simmaxstab.R, src/simgeometric.c: Add the simulation of the
	  geometric gaussian process

2009-07-08 13:17  mathieu_ribatet

	* R/fitcovmat.R: Fix a typo

2009-06-30 08:28  mathieu_ribatet

	* R/plots.R: Fix a bug in the map function - shape parameter maps
	  were not produced

2009-06-30 08:25  mathieu_ribatet

	* man/simmaxstab.Rd: Fix a typo

2009-05-27 14:11  mathieu_ribatet

	* src/utils.c: Initialize dist within this function to avoid
	  initialization outside

2009-05-27 14:11  mathieu_ribatet

	* src/direct.c, src/randomlines.c: Minor changes to avoid warnings
	  from the compilers

2009-05-26 13:49  mathieu_ribatet

	* ChangeLog, DESCRIPTION: Update changelog and release version

2009-05-26 13:48  mathieu_ribatet

	* src/Makevars: Minor change to Makevars

2009-05-26 13:39  mathieu_ribatet

	* src/simsmith.c: Cleaning C code

2009-05-26 13:39  mathieu_ribatet

	* src/direct.c, src/gradients.c, src/randomlines.c,
	  src/simschlather.c, src/turningbands.c: Cleaning C code

2009-05-26 13:33  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw, inst/doc/layout.sty,
	  inst/doc/references.bib: Update the vignette

2009-05-18 14:44  mathieu_ribatet

	* src/pairwiselik.c, src/schlather.c, src/smith.c, src/smith3d.c:
	  The pairwise likelihood now uses univariate density in presence
	  of
	  "numerical" complete dependence

2009-05-18 14:43  mathieu_ribatet

	* src/header.h: Changes due to the implementation of new C code and
	  the use of Lapack

2009-05-18 14:42  mathieu_ribatet

	* src/covariance.c: Minor changes - boundary cases

2009-05-18 14:41  mathieu_ribatet

	* man/TIC.Rd, man/anova.Rd, man/condmap.Rd, man/covariance.Rd,
	  man/extcoeff.Rd, man/extcoeffemp.Rd, man/fitcovariance.Rd,
	  man/fitcovmat.Rd, man/fitmaxstab.Rd, man/fitspatgev.Rd,
	  man/fmadogram.Rd, man/lmadogram.Rd, man/logLik.maxstab.Rd,
	  man/madogram.Rd, man/map.Rd, man/predict.maxstab.Rd,
	  man/predict.spatgev.Rd, man/print.maxstab.Rd,
	  man/print.spatgev.Rd, man/profile.maxstab.Rd,
	  man/profile2d.maxstab.Rd, man/qqextcoeff.Rd, man/qqgev.Rd,
	  man/simmaxstab.Rd: The examples now use my functions instead of
	  the ones provided by the
	  RandomFields package

2009-05-18 14:40  mathieu_ribatet

	* src/simmaxstab.c: Removed unnecessary file

2009-05-18 14:39  mathieu_ribatet

	* R/simmaxstab.R, src/simschlather.c, src/simsmith.c: New code
	  related to the simulation of stationary max-stable random
	  fields

2009-05-18 14:38  mathieu_ribatet

	* R/randomlines.R, R/simgaussproc.R, man/rgp.Rd, man/vdc.Rd,
	  src/Makevars, src/direct.c, src/randomlines.c,
	  src/turningbands.c: New code related to the simulation of
	  stationary gaussian processes by
	  using the direct and the turning bands methods

2009-05-18 14:36  mathieu_ribatet

	* R/fitcovmat.R: Use the isotropic definition for the extremal
	  coefficient if iso =
	  TRUE

2009-05-18 14:35  mathieu_ribatet

	* R/covariance.R: Allow for the sill to be larger than 1 as now
	  gaussian processes are
	  implemented

2009-05-18 14:35  mathieu_ribatet

	* R/geomgauss.R, R/nsgeomgauss.R, R/profile.R, R/schlather.R,
	  R/schlatherind.R, R/smith.R, R/spatgev.R, R/starting.values.R:
	  remove the definition of parscale in optim and avoid using
	  Nelder-Mead
	  optimizer for one-dimensional problems

2009-05-05 21:39  mathieu_ribatet

	* R/simmaxstab.R, man/simmaxstab.Rd, src/simmaxstab.c: Extend the
	  simulation from the Smith model

2009-05-05 21:37  mathieu_ribatet

	* R/selection.R, R/smith.R, R/spatgev.R: Remove the qr
	  decomposition for the computation of the inverse of the
	  hessian matrix as it seems to be less robust

2009-05-05 21:35  mathieu_ribatet

	* R/fitcovmat.R: Add the iso as an argument of the output and
	  compute the special
	  version of the extremal coefficient function when iso = TRUE

2009-04-30 15:04  mathieu_ribatet

	* R/simmaxstab.R, man/simmaxstab.Rd, src/simmaxstab.c: A first
	  version of a function that generates observations from a Smith
	  random field

2009-04-30 15:03  mathieu_ribatet

	* src/pairwiselik.c: Minor changes

2009-04-30 15:02  mathieu_ribatet

	* man/fitcovmat.Rd: Add the control in optim as an argument

2009-04-30 15:02  mathieu_ribatet

	* R/spatgev.R: Minor changes

2009-04-30 15:01  mathieu_ribatet

	* R/profile.R: Some minor changes: control in optim, ...

2009-04-30 15:01  mathieu_ribatet

	* R/plots.R, R/smith.R: If iso = TRUE in the smith model the
	  extremal coefficient function is
	  then one-dimensional

2009-04-30 15:00  mathieu_ribatet

	* R/madogram.R, man/fmadogram.Rd, man/madogram.Rd: The madogram
	  plots now accept a fitted model as an argument to compare
	  pairwise estimates and model based ones

2009-04-30 14:58  mathieu_ribatet

	* R/covariance.R, R/fitcovmat.R, R/geomgauss.R, R/methods.R,
	  R/nsgeomgauss.R, R/schlather.R, R/schlatherind.R,
	  man/covariance.Rd, man/fitcovariance.Rd, man/fitmaxstab.Rd,
	  src/covariance.c, src/fitcovmat.c, src/geomgauss.c,
	  src/gradients.c, src/header.h, src/nsgeomgauss.c,
	  src/schlather.c, src/schlatherind.c: Implementation of the Bessel
	  covariance function

2009-04-20 09:31  mathieu_ribatet

	* ChangeLog: Update the changelog

2009-04-17 15:48  mathieu_ribatet

	* src/gradients.c: Fix a bug in the computation of the gradient for
	  smith3d. Now it's
	  correct!

2009-04-17 15:29  mathieu_ribatet

	* src/pairwiselik.c: Minor optimization

2009-04-17 15:28  mathieu_ribatet

	* src/covariance.c: Try to optimize the computation of all the
	  covariance

2009-04-10 13:37  mathieu_ribatet

	* ChangeLog: Update the ChangeLog

2009-04-10 13:35  mathieu_ribatet

	* ChangeLog, DESCRIPTION: Update the version number and the
	  ChangeLog file

2009-04-10 10:06  mathieu_ribatet

	* src/covariance.c: Minor changes

2009-04-10 10:06  mathieu_ribatet

	* R/geomgauss.R, R/gradients.R, src/gradients.c, src/header.h: Add
	  the computation of the gradient for the geometric gaussian model

2009-04-09 14:18  mathieu_ribatet

	* src/pairwiselik.c: Minor optimizations

2009-04-09 14:17  mathieu_ribatet

	* src/gradients.c: Minor optimizations - and fix a bug in
	  Schlather's gradient

2009-04-09 14:16  mathieu_ribatet

	* src/covariance.c: Minor optimizations

2009-04-07 15:45  mathieu_ribatet

	* src/utils.c: Some minor optimizations

2009-04-07 15:44  mathieu_ribatet

	* src/univllik.c: Bug : replace '|' by '||' i.e. logical operator

2009-04-07 15:44  mathieu_ribatet

	* src/spatgevlik.c: Minor change

2009-04-07 15:43  mathieu_ribatet

	* src/smith3d.c: Bug : replace '|' by '||' i.e. logical operator

2009-04-07 15:42  mathieu_ribatet

	* src/smith.c: Bug : replace '|' by '||' i.e. logical operator

2009-04-07 15:42  mathieu_ribatet

	* src/schlatherind.c: Bug : replace '|' by '||' i.e. logical
	  operator

2009-04-07 15:42  mathieu_ribatet

	* src/schlather.c: Optimize the computation of the pairwise
	  likelihood

2009-04-07 15:42  mathieu_ribatet

	* src/pairwiselik.c: Optimize the computation of the pairwise
	  likelihood

2009-04-07 15:41  mathieu_ribatet

	* src/nsgeomgauss.c: Bug : replace '|' by '||' i.e. logical
	  operator

2009-04-07 15:41  mathieu_ribatet

	* src/gradients.c: Optimize the computation of the gradient and fix
	  some errors

2009-04-07 15:40  mathieu_ribatet

	* src/geomgauss.c: Bug : replace '|' by '||' i.e. logical operator

2009-04-07 15:40  mathieu_ribatet

	* src/fitcovmat.c: Optmize the computation of weighted sum of
	  squares

2009-04-07 15:39  mathieu_ribatet

	* src/covariance.c: Optmize the computation of pairwise covariance

2009-04-07 15:39  mathieu_ribatet

	* R/starting.values.R: Minor change

2009-04-07 15:38  mathieu_ribatet

	* R/spatgev.R: Now fitspatgev uses all the optimizers as in
	  fitmaxstab

2009-04-07 15:37  mathieu_ribatet

	* R/gradients.R: Add argument jacobian = TRUE for consistency with
	  other functions

2009-04-07 15:37  mathieu_ribatet

	* R/fitcovmat.R: Change the default starting values

2009-02-19 13:05  mathieu_ribatet

	* man/fitmaxstab.Rd: Add references (Mehdi and Simone)

2009-02-17 13:46  mathieu_ribatet

	* src/covariance.c: Speed up the code

2009-02-17 13:45  mathieu_ribatet

	* DESCRIPTION: Update the version number

2009-02-17 13:45  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw, inst/doc/layout.sty,
	  inst/doc/references.bib: Update the vignette

2009-02-07 21:19  mathieu_ribatet

	* ChangeLog, DESCRIPTION: Update the ChangeLog and the DESCRIPTION
	  file for the version 1.1-0

2009-02-07 21:10  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Fix an error in the definition
	  of a elliptical covariance function

2009-02-05 23:43  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw, inst/doc/layout.sty,
	  inst/doc/references.bib: Update the vignette

2009-02-05 23:42  mathieu_ribatet

	* R/fitcovmat.R: Fig a bug when held fixing parameter and defining
	  starting values

2009-02-05 15:03  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw, inst/doc/references.bib:
	  Update the vignette

2009-02-05 15:03  mathieu_ribatet

	* R/psplines.R: Redifine the GCV score so that it has the same
	  scale as CV

2009-01-31 23:40  mathieu_ribatet

	* R/utils.R: Found a more clever way to deal with 1-dimensional
	  coordinates

2009-01-31 23:33  mathieu_ribatet

	* R/utils.R: The function distance wasn't working if the
	  coordinates where scalar,
	  fixed!

2009-01-30 23:52  mathieu_ribatet

	* R/fitcovmat.R: Set weights that are really small (i.e. <= 1e-4)
	  to more feasible
	  values

2009-01-18 17:36  mathieu_ribatet

	* man/fitcovariance.Rd, man/fitcovmat.Rd, man/fitspatgev.Rd: The
	  dots arguments was inverting with the start one

2009-01-18 17:35  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Remove draft sections from the
	  vignette

2009-01-18 17:35  mathieu_ribatet

	* R/fitcovmat.R: Use different function names to avoid warning
	  messages when compiling

2009-01-18 15:10  mathieu_ribatet

	* R/fitcovmat.R: Improve how starting values are defined

2009-01-18 15:10  mathieu_ribatet

	* R/geomgauss.R, R/schlatherind.R, R/spatgev.R: Improve how
	  starting values are defined

2009-01-18 15:09  mathieu_ribatet

	* R/starting.values.R: Improve how starting values are defined

2009-01-16 17:35  mathieu_ribatet

	* R/fitcovmat.R, man/fitcovariance.Rd, src/fitcovmat.c,
	  src/header.h: Allow the use of the independent Schlather and
	  geometric Gaussian
	  models for the least squares fitting procedure

2009-01-15 18:31  mathieu_ribatet

	* R/geomgauss.R: Fix a bug in defining the starting values for
	  geomgaussfull

2009-01-14 23:19  mathieu_ribatet

	* R/extcoeff.R, R/madogram.R, inst/doc/SpatialExtremesGuide.Rnw:
	  Minor changes

2009-01-14 13:24  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Add some proofs

2009-01-14 13:23  mathieu_ribatet

	* R/starting.values.R: Fix a bug. I omit to specify the covariance
	  model when computing
	  appropriate starting values for the Schlather model

2009-01-14 13:23  mathieu_ribatet

	* R/madogram.R, src/madogram.c: We now use the corrected
	  lambda-madogram - thanks to D. Cooley

2009-01-12 09:06  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Extend the response surfaces
	  section - not finished

2009-01-12 09:03  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Add proof for the derivation
	  of the Smith and geometric Gaussian
	  models

2009-01-06 15:06  mathieu_ribatet

	* man/lmadogram.Rd: Fix a wrong argument in the example

2009-01-03 01:58  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Improve (a lot!) the package
	  vignette. It's for from being finished
	  though...

2009-01-03 01:56  mathieu_ribatet

	* R/modelChecking.R, R/starting.values.R: Minor changes

2009-01-02 17:43  mathieu_ribatet

	* inst/doc/references.bib: Update reference list

2009-01-02 17:43  mathieu_ribatet

	* R/plots.R: Move the qqextcoeff function to the modelChecking.R
	  file

2009-01-02 17:42  mathieu_ribatet

	* R/selection.R: Minor changes

2009-01-02 17:42  mathieu_ribatet

	* R/starting.values.R: Now starting values for the GEV margins are
	  defined by using the
	  fitspatgev function

2009-01-02 17:42  mathieu_ribatet

	* R/spatgev.R: Minor changes

2009-01-02 17:41  mathieu_ribatet

	* R/geomgauss.R, R/nsgeomgauss.R, R/schlather.R, R/schlatherind.R,
	  R/smith.R: Pass defaults values for parscale and change the
	  initialization for
	  starting values

2009-01-02 17:40  mathieu_ribatet

	* R/extcoeff.R: Moving the madogram function to the madogram.R file

2009-01-02 17:39  mathieu_ribatet

	* R/covariance.R: If xlim is supplied the function doesn't compute
	  appropriate x.range

2009-01-02 17:38  mathieu_ribatet

	* src/header.h: The header for the madogram-based approaches

2009-01-02 17:38  mathieu_ribatet

	* src/covariance.c, src/pairwiselik.c, src/utils.c: Optimize the
	  code: now fitting a max-stable process by maximizing the
	  pairwise-likelihood is 40% times faster

2009-01-02 17:36  mathieu_ribatet

	* man/anova.Rd, man/fitmaxstab.Rd, man/fitspatgev.Rd,
	  man/madogram.Rd: Update the documentation files

2009-01-02 17:35  mathieu_ribatet

	* inst/doc/Figures/geomGauss2Sim.eps,
	  inst/doc/Figures/geomGauss2Sim.pdf: Add figures for the geometric
	  gaussian process - 2 simulations

2009-01-02 17:34  mathieu_ribatet

	* R/madogram.R, R/modelChecking.R, R/univdist.R, inst/doc/Figures,
	  man/GEV.Rd, man/GPD.Rd, man/fmadogram.Rd, man/lmadogram.Rd,
	  man/qqgev.Rd, src/madogram.c: Add the madogram-based approaches,
	  model checking and univariate EVD
	  functions

2008-12-19 15:54  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Update the package Vignette

2008-12-19 10:03  mathieu_ribatet

	* man/SpatialExtremes.Rd: Updating the main man page.

2008-12-19 10:00  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Updating the vignette.

2008-12-18 08:35  mathieu_ribatet

	* man/SpatialExtremes.Rd: Wrong link to the profile2d.maxstab
	  function

2008-12-17 21:18  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw: Correct English and grammar
	  thanks to Anthony

2008-12-17 20:22  mathieu_ribatet

	* R/fitcovmat.R, src/fitcovmat.c: Test if we have 0 weights and set
	  a really huge value for non feasible
	  regions

2008-12-17 20:21  mathieu_ribatet

	* src/schlatherind.c: Changes due to the new way I deal with non
	  feasible region

2008-12-16 18:49  mathieu_ribatet

	* R/fitcovmat.R: Improve this functions

2008-12-16 18:48  mathieu_ribatet

	* R/starting.values.R: The sill isn't fix for the starting values
	  as it may cause troubles
	  when fixing it for the model definition

2008-12-16 18:47  mathieu_ribatet

	* R/spatgev.R: Minor change: adding the logLik value in the output

2008-12-16 18:47  mathieu_ribatet

	* R/smith.R: I forgot to pass the option iso = iso when computing
	  the variance of
	  the score

2008-12-16 18:44  mathieu_ribatet

	* src/gradients.c: Fix a bug in the computation of the gradient
	  (only present when
	  reponse surfaces are used for the GEV parameters)

2008-12-16 18:41  mathieu_ribatet

	* src/extcoeff.c: Do not set pointwise estimate to 1 or 2 if they
	  lie outsite of [1,2]

2008-12-16 18:40  mathieu_ribatet

	* src/covariance.c, src/fitcovmat.c, src/geomgauss.c,
	  src/nsgeomgauss.c, src/pairwiselik.c, src/schlather.c,
	  src/schlatherind.c, src/smith.c, src/smith3d.c, src/utils.c:
	  Final change for unfeasible regions: finally setting MINF to the
	  log-likelihood for unfeasible region is the "best" way

2008-12-16 18:38  mathieu_ribatet

	* man/covariance.Rd, man/extcoeff.Rd, man/fitmaxstab.Rd,
	  man/fitspatgev.Rd, man/modeldef.Rd: Update and refine the
	  documentation files

2008-12-12 16:22  mathieu_ribatet

	* src/univllik.c: Improve the code for speed

2008-12-11 21:25  mathieu_ribatet

	* R/fitcovmat.R, man/fitcovariance.Rd, man/fitcovmat.Rd: Using the
	  optim as optimizer instead of nlm - more robust

2008-12-11 15:09  mathieu_ribatet

	* R/fitcovmat.R, R/starting.values.R: Adjust the starting values

2008-12-11 15:09  mathieu_ribatet

	* R/gradients.R, R/selection.R, R/spatgev.R, man/TIC.Rd,
	  man/anova.Rd, man/fitspatgev.Rd, man/print.spatgev.Rd,
	  src/gradients.c, src/header.h: Computes the sandwich estimate of
	  the asymptotic covariance
	  matrix. TIC and ANOVA are thus available.

2008-12-10 20:21  mathieu_ribatet

	* man/fitspatgev.Rd, man/predict.spatgev.Rd, man/print.spatgev.Rd:
	  Add a function to fit a "spatial" gev model e.g. GEV parameters
	  are
	  modelled through response surfaces: doc files.

2008-12-10 15:56  mathieu_ribatet

	* src/univllik.c: Fix a bug in testing if the scale and shape
	  paremeters were badly
	  defined.

2008-12-10 15:55  mathieu_ribatet

	* R/methods.R, R/predict.R, R/spatgev.R, src/header.h,
	  src/spatgevlik.c: Add a function to fit a "spatial" gev model
	  e.g. GEV parameters are
	  modelled through response surfaces. Related methods and
	  predictions
	  are also implemented.

2008-12-09 16:17  mathieu_ribatet

	* R/nsgeomgauss.R, R/starting.values.R, src/header.h,
	  src/nsgeomgauss.c: Add the non-stationary geom. gauss. model with
	  response surfaces for
	  the GEV parameters

2008-12-07 12:54  mathieu_ribatet

	* src/covariance.c: Minor change

2008-12-07 12:18  mathieu_ribatet

	* src/covariance.c, src/utils.c: Optimizing the C code: improve
	  conditioning tests

2008-12-07 11:34  mathieu_ribatet

	* man/SpatialExtremes.Rd, man/TIC.Rd, man/condmap.Rd,
	  man/extcoeff.Rd, man/fitmaxstab.Rd, man/rb.Rd: Proof-read the man
	  pages due to a mail in the r-devel list

2008-12-06 15:34  mathieu_ribatet

	* src/nsgeomgauss.c: Minor changes

2008-12-06 15:34  mathieu_ribatet

	* src/covariance.c: Fix a bug in the nsgeomgauss covariance
	  function computations

2008-12-03 09:22  mathieu_ribatet

	* R/fitcovmat.R: Do not use the same function name whatever the iso
	  argument is to
	  avoid a warning message while building the package

2008-12-03 09:22  mathieu_ribatet

	* R/nsgeomgauss.R, man/internals.Rd: Masking the non-stationary
	  geom. gauss. model for the moment

2008-12-03 09:21  mathieu_ribatet

	* src/covariance.c: There was an uninitialized variable

2008-12-03 08:33  mathieu_ribatet

	* src/utils.c: Remove unused variable

2008-12-02 17:15  mathieu_ribatet

	* ChangeLog, DESCRIPTION: Update ChangeLog and DESCRIPTION for the
	  new release

2008-12-02 17:02  mathieu_ribatet

	* R/plots.R, man/qqextcoeff.Rd: Add a function that performs a
	  QQ-plot for the extremal coefficient

2008-12-02 15:58  mathieu_ribatet

	* src/nsgeomgauss.c: Change the way I deal with non-feasible
	  regions

2008-12-02 15:58  mathieu_ribatet

	* man/internals.Rd: Mask the non-stationary geom. gauss. model

2008-12-02 15:57  mathieu_ribatet

	* R/fitcovmat.R, R/fitmaxstable.R, R/gradients.R, R/smith.R,
	  R/starting.values.R, man/fitcovmat.Rd, man/fitmaxstab.Rd:
	  Implementation of an isotropic smith's model

2008-12-02 10:53  mathieu_ribatet

	* R/starting.values.R, src/covariance.c, src/fitcovmat.c,
	  src/geomgauss.c, src/nsgeomgauss.c, src/pairwiselik.c,
	  src/schlather.c, src/schlatherind.c, src/smith.c, src/smith3d.c,
	  src/utils.c: Change the way starting values are defined - i.e.
	  fixing the sill
	  Change the way we deal with non feasible regions

2008-11-28 12:12  mathieu_ribatet

	* R/fitmaxstable.R, R/geomgauss.R, R/nsgeomgauss.R: Add the
	  geometric gaussian model - non stationary

2008-11-28 12:11  mathieu_ribatet

	* src/covariance.c, src/header.h, src/nsgeomgauss.c, src/utils.c:

2008-11-27 14:42  mathieu_ribatet

	* src/covariance.c, src/extcoeff.c, src/fitcovmat.c,
	  src/geomgauss.c, src/schlather.c, src/schlatherind.c,
	  src/smith.c, src/smith3d.c, src/univllik.c, src/utils.c: Add
	  comments within the code.
	  Tweak how I deal with the unfeasible region when the GEV
	  parameters
	  are ill-defined

2008-11-19 13:58  mathieu_ribatet

	* R/starting.values.R: There was a duplicate of function
	  .start.schlatherind

2008-11-19 11:36  mathieu_ribatet

	* src/covariance.c: Fix a bug in geomCovariance, sigma2 was not set
	  to the right value
	  when it tends to get large

2008-11-19 11:29  mathieu_ribatet

	* src/geomgauss.c: Update some comments in the code

2008-11-19 11:20  mathieu_ribatet

	* DESCRIPTION: Pass the RandomFields packages as a dependence

2008-11-19 11:16  mathieu_ribatet

	* R/extcoeff.R, man/madogram.Rd: Add an angle argument in
	  madogram() to help in detecting anisotropy

2008-11-18 15:53  mathieu_ribatet

	* src/schlatherind.c: Fix a bug in schlatherinddsgnmat: the non
	  feasible region was not
	  penalized for all cases

2008-11-17 12:57  mathieu_ribatet

	* src/covariance.c: Changing how to deal with smooth >= 2 for the
	  powered exponential
	  covariance model

2008-10-31 16:45  mathieu_ribatet

	* src/covariance.c, src/fitcovmat.c, src/geomgauss.c, src/header.h,
	  src/schlather.c, src/schlatherind.c, src/smith.c, src/smith3d.c,
	  src/utils.c: Change the behaviour with non-feasible regions:
	  seems to be more
	  robust now...

2008-10-28 13:44  mathieu_ribatet

	* src/covariance.c: Add an upper bound (i.e. 3) for the sigma2
	  parameter in the geometric
	  gaussian process

2008-10-24 07:54  mathieu_ribatet

	* R/covariance.R, src/covariance.c: Update the bounds for the
	  covariance functions to avoid numerical
	  issues

2008-10-22 16:05  mathieu_ribatet

	* DESCRIPTION: Add a link to the project web page

2008-10-22 12:23  mathieu_ribatet

	* src/univllik.c, src/utils.c: Now the Gumbel distribution is
	  considered whenever the shape parameter
	  is <= 1-6

2008-10-22 12:22  mathieu_ribatet

	* R/extcoeff.R, man/madogram.Rd: Change the madogram function. Now
	  it is computed for each pairwise
	  distance - bins can be optionnaly passed though

2008-10-16 12:39  mathieu_ribatet

	* inst/doc/SpatialExtremesGuide.Rnw, man/condmap.Rd,
	  man/covariance.Rd, man/extcoeffemp.Rd, man/fitcovariance.Rd,
	  man/fitmaxstab.Rd, man/madogram.Rd, man/map.Rd,
	  man/predict.maxstab.Rd, man/profile.maxstab.Rd: Modifying the
	  vignette and example to reduce the time to build the
	  package

2008-10-13 10:28  mathieu_ribatet

	* src/geomgauss.c, src/gradients.c, src/schlather.c,
	  src/schlatherind.c, src/smith.c, src/smith3d.c: Cleaning the
	  code: unused declared variables
	  Fix a mistake in computing the gradient dz2shape instead of
	  dz2scale

2008-10-11 22:45  mathieu_ribatet

	* man/prior.Rd: remove one copy of prior.Rd

2008-10-11 22:44  mathieu_ribatet

	* man/posterior.Rd: remove one copy of posterior.Rd

2008-10-09 08:53  mathieu_ribatet

	* R/mcmc.R: moving mcmc.R to the development folder

2008-10-07 13:45  mathieu_ribatet

	* R/psplines.R: Misplace conditional if resulting in cv = NA even
	  when penalty = "gcv"
	  or "cv"

2008-10-06 22:12  mathieu_ribatet

	* R/fitmaxstable.R, R/plots.R, man/SpatialExtremes.Rd,
	  man/anova.Rd, man/condmap.Rd, man/fitmaxstab.Rd: Add the
	  conditional quantile map and refine the documentation

2008-10-06 20:08  mathieu_ribatet

	* doc: Moving the package to the /pkg folder

2008-10-06 20:07  mathieu_ribatet

	* R: Moving the package to the /pkg folder

2008-10-06 20:07  mathieu_ribatet

	* doc, doc/SpatialExtremesGuide.Rnw, doc/references.bib: Moving the
	  package to the /pkg folder

2008-10-06 20:07  mathieu_ribatet

	* inst: Moving the package to the /pkg folder

2008-10-06 20:06  mathieu_ribatet

	* man: Moving the package to the /pkg folder

2008-10-06 20:06  mathieu_ribatet

	* src: Moving the package to the /pkg folder

2008-10-06 19:59  mathieu_ribatet

	* DESCRIPTION: Move the package to the r-forge repo

2008-10-06 19:59  mathieu_ribatet

	* ChangeLog: Move the package to the r-forge repo

2008-10-06 19:51  mathieu_ribatet

	* .: re-creating the pkg folder