NFP: Network Fingerprint Framework in R
An implementation of the network fingerprint framework that introduced
in paper "Network fingerprint: a knowledge-based characterization of biomedical
networks" (Cui, 2015) <doi:10.1038/srep13286>. This method worked by making
systematic comparisons to a set of well-studied "basic networks", measuring
both the functional and topological similarity. A biological could be
characterized as a spectrum-like vector consisting of similarities to basic
networks. It shows great potential in biological network study.
| Version: |
0.99.4 |
| Depends: |
R (≥ 3.2.0), graph |
| Imports: |
igraph, stringr, magrittr, plyr, ggplot2, apcluster, KEGGgraph, dplyr, tidyr, methods |
| Suggests: |
knitr, testthat, graphite, NFPdata, rmarkdown |
| Published: |
2021-04-12 |
| Author: |
Yang Cao [aut, cre],
Fei Li [aut] |
| Maintainer: |
Yang Cao <caoyang.name at gmail.com> |
| BugReports: |
https://github.com/yiluheihei/NFP/issues |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: |
https://github.com/yiluheihei/NFP |
| NeedsCompilation: |
no |
| Additional_repositories: |
https://yiluheihei.github.io/datarepo/ |
| Materials: |
README |
| CRAN checks: |
NFP results |
Documentation:
Downloads:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=NFP
to link to this page.