NFP: Network Fingerprint Framework in R
An implementation of the network fingerprint framework that introduced
in paper "Network fingerprint: a knowledge-based characterization of biomedical
networks" (Cui, 2015) <doi:10.1038/srep13286>. This method worked by making
systematic comparisons to a set of well-studied "basic networks", measuring
both the functional and topological similarity. A biological could be
characterized as a spectrum-like vector consisting of similarities to basic
networks. It shows great potential in biological network study.
Version: |
0.99.4 |
Depends: |
R (≥ 3.2.0), graph |
Imports: |
igraph, stringr, magrittr, plyr, ggplot2, apcluster, KEGGgraph, dplyr, tidyr, methods |
Suggests: |
knitr, testthat, graphite, NFPdata, rmarkdown |
Published: |
2021-04-12 |
Author: |
Yang Cao [aut, cre],
Fei Li [aut] |
Maintainer: |
Yang Cao <caoyang.name at gmail.com> |
BugReports: |
https://github.com/yiluheihei/NFP/issues |
License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
URL: |
https://github.com/yiluheihei/NFP |
NeedsCompilation: |
no |
Additional_repositories: |
https://yiluheihei.github.io/datarepo/ |
Materials: |
README |
CRAN checks: |
NFP results |
Documentation:
Downloads:
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