LDAandLDAS: Linkage Disequilibrium of Ancestry (LDA) and LDA Score (LDAS)
Computation of linkage disequilibrium of ancestry (LDA) and linkage disequilibrium of ancestry score (LDAS). LDA calculates the pairwise linkage disequilibrium of ancestry between single nucleotide polymorphisms (SNPs). LDAS calculates the LDA score of SNPs. The methods are described in Barrie W, Yang Y, Irving-Pease E.K, et al (2024) <doi:10.1038/s41586-023-06618-z>.
| Version: | 1.1.3 |
| Depends: | R (≥ 3.5.0) |
| Imports: | Rcpp (≥ 1.0.8), parallel |
| LinkingTo: | Rcpp |
| Published: | 2024-02-09 |
| DOI: | 10.32614/CRAN.package.LDAandLDAS |
| Author: | Yaoling Yang 
[aut, cre],
Daniel Lawson
[aut] |
| Maintainer: | Yaoling Yang <yaoling.yang at bristol.ac.uk> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| Materials: | README |
| CRAN checks: | LDAandLDAS results |
Documentation:
| Reference manual: | LDAandLDAS.pdf |
Downloads:
| Package source: | LDAandLDAS_1.1.3.tar.gz |
| Windows binaries: | r-devel: LDAandLDAS_1.1.3.zip, r-release: LDAandLDAS_1.1.3.zip, r-oldrel: LDAandLDAS_1.1.3.zip |
| macOS binaries: | r-release (arm64): LDAandLDAS_1.1.3.tgz, r-oldrel (arm64): LDAandLDAS_1.1.3.tgz, r-release (x86_64): LDAandLDAS_1.1.3.tgz, r-oldrel (x86_64): LDAandLDAS_1.1.3.tgz |
| Old sources: | LDAandLDAS archive |
Linking:
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