Last updated on 2026-04-13 11:57:59 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.70 | 272.80 | 287.50 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.41 | 231.23 | 242.64 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 303.98 | 325.98 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 345.52 | 376.52 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 198.00 | 220.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 17.39 | 342.95 | 360.34 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 12.92 | 348.12 | 361.04 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 382.00 | 394.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 0.00 | 18.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 545.00 | 556.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 243.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [106s/328s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.763, system: 0.095, elapsed: 3.497 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.954, system: 0.164, elapsed: 17.384 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.022, elapsed: 0.912 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.752, system: 0.928, elapsed: 12.866 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.009, elapsed: 0.242 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.491, system: 1.249, elapsed: 35.849 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.689, system: 0.074, elapsed: 2.151 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.484, system: 0.146, elapsed: 11.779 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.284, system: 0.027, elapsed: 0.320 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.051, system: 0.845, elapsed: 18.898 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.004, elapsed: 0.194 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.362, system: 1.136, elapsed: 34.161 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.046, elapsed: 1.894 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.708, system: 0.082, elapsed: 13.117 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.320, system: 0.017, elapsed: 1.199 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.790, system: 1.016, elapsed: 83.178 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.009, elapsed: 0.574 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.408, system: 0.374, elapsed: 3.015 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.698, system: 1.659, elapsed: 104.423 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.667, system: 0.069, elapsed: 5.276 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.229, system: 0.149, elapsed: 23.651 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.020, elapsed: 1.120 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.404, system: 0.910, elapsed: 68.403 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.009, elapsed: 0.241 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.351, system: 0.721, elapsed: 43.509 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.817, system: 1.978, elapsed: 143.801 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/492s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.619, system: 0.049, elapsed: 3.057 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.615, system: 0.092, elapsed: 14.658 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.020, elapsed: 0.831 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.284, system: 0.707, elapsed: 44.247 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.187 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.480, system: 0.896, elapsed: 63.803 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.563, system: 0.034, elapsed: 2.301 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.642, system: 0.054, elapsed: 13.174 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.018, elapsed: 1.096 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.011, system: 1.012, elapsed: 143.397 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.015, elapsed: 0.417 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.181, system: 1.160, elapsed: 161.239 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.682, system: 0.063, elapsed: 4.007 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.965, system: 0.235, elapsed: 20.185 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.019, elapsed: 1.072 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.881, system: 0.966, elapsed: 125.046 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.006, elapsed: 0.298 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.262, system: 0.256, elapsed: 1.443 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.893, system: 1.644, elapsed: 153.815 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.540, system: 0.033, elapsed: 2.574 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.505, system: 0.071, elapsed: 14.954 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.017, elapsed: 1.042 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.420, system: 0.723, elapsed: 56.668 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.237 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.745, system: 0.796, elapsed: 27.873 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.305, system: 1.678, elapsed: 104.460 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64