Last updated on 2025-07-23 11:50:26 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.44 | 244.35 | 257.79 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.75 | 228.19 | 238.94 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 178.00 | 198.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.66 | 250.48 | 264.14 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 174.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 185.00 | 204.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 178.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 22.00 | 236.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.044, elapsed: 1.855 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.002, system: 0.107, elapsed: 12.180 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.015, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.708, system: 0.192, elapsed: 4.934 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.245 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.107, system: 0.386, elapsed: 20.238 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.466, system: 0.035, elapsed: 2.102 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.017, system: 0.089, elapsed: 13.860 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.296 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.707, system: 0.170, elapsed: 6.566 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.004, elapsed: 0.275 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.084, system: 0.332, elapsed: 23.930 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.541, system: 0.034, elapsed: 2.622 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.994, system: 0.079, elapsed: 14.634 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.286 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.721, system: 0.186, elapsed: 6.428 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.332 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.157, system: 0.224, elapsed: 2.124 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.415, system: 0.560, elapsed: 27.715 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.452, system: 0.035, elapsed: 3.771 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.885, system: 0.051, elapsed: 19.608 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.321 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.762, system: 0.181, elapsed: 6.640 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.279 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.206, system: 0.435, elapsed: 15.129 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.301, system: 0.750, elapsed: 47.094 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/120s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.516, system: 0.042, elapsed: 2.258 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.015, system: 0.071, elapsed: 11.652 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.014, elapsed: 0.207 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.644, system: 0.194, elapsed: 5.343 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.004, elapsed: 0.199 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.057, system: 0.348, elapsed: 20.499 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.480, system: 0.035, elapsed: 1.940 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.933, system: 0.063, elapsed: 13.040 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.014, elapsed: 0.457 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.648, system: 0.166, elapsed: 10.802 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.479 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.935, system: 0.306, elapsed: 27.817 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.534, system: 0.031, elapsed: 4.710 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.976, system: 0.058, elapsed: 16.307 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.360 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.605, system: 0.203, elapsed: 5.536 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.205 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.067, system: 0.225, elapsed: 0.886 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.153, system: 0.572, elapsed: 29.380 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.516, system: 0.045, elapsed: 2.044 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.099, system: 0.188, elapsed: 13.682 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.383 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.627, system: 0.200, elapsed: 5.190 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.003, elapsed: 0.176 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.952, system: 0.454, elapsed: 12.428 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.172, system: 0.943, elapsed: 34.805 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64