CRAN Package Check Results for Maintainer Davide Chicco <davidechicco at davidechicco.it>

CRAN Package Check Results for Maintainer ‘Davide Chicco <davidechicco at davidechicco.it>’

Last updated on 2025-05-14 11:50:59 CEST.

Package	ERROR	NOTE	OK
DBCVindex			13
geneExpressionFromGEO	1	2	10
SaturnCoefficient			13

Package geneExpressionFromGEO

Current CRAN status: ERROR: 1, NOTE: 2, OK: 10

Version: 1.2
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘qpdf’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.2
Check: examples
Result: ERROR Running examples in ‘geneExpressionFromGEO-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: getGeneExpressionFromGEO > ### Title: Function that reads in the GEO code of a dataset, and returns > ### the gene expression dataframe. > ### Aliases: getGeneExpressionFromGEO > > ### ** Examples > > geneExpressionDF1 <- getGeneExpressionFromGEO("GSE47018", FALSE, FALSE) Processed URL: https://ftp.ncbi.nlm.nih.gov/geo/series/ Error in open.connection(x, "rb") : cannot open the connection Calls: getGeneExpressionFromGEO -> <Anonymous> -> read_html.default Execution halted Flavor: r-release-linux-x86_64

Package SaturnCoefficient

Current CRAN status: OK: 13