Last updated on 2024-04-15 11:56:37 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.5 | 57.19 | 541.25 | 598.44 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.5 | 45.95 | 413.51 | 459.46 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.5 | 798.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.5 | 805.72 | OK | |||
| r-prerel-macos-arm64 | 0.1.5 | 214.00 | OK | |||
| r-prerel-macos-x86_64 | 0.1.5 | 376.00 | OK | |||
| r-prerel-windows-x86_64 | 0.1.5 | 52.00 | 365.00 | 417.00 | OK | |
| r-patched-linux-x86_64 | 0.1.5 | 54.60 | 522.42 | 577.02 | OK | |
| r-release-linux-x86_64 | 0.1.5 | 52.70 | 547.59 | 600.29 | OK | |
| r-release-macos-arm64 | 0.1.5 | 9.00 | ERROR | |||
| r-release-macos-x86_64 | 0.1.5 | 6.00 | ERROR | |||
| r-release-windows-x86_64 | 0.1.5 | 67.00 | 640.00 | 707.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.4 | 127.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.1.4 | 66.00 | 423.00 | 489.00 | ERROR |
Version: 0.1.5
Check: package dependencies
Result: ERROR
Package required but not available: ‘GSVA’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavors: r-release-macos-arm64, r-release-macos-x86_64
Version: 0.1.4
Check: examples
Result: ERROR
Running examples in 'SMDIC-Ex.R' failed
The error most likely occurred in:
> ### Name: exp2cell
> ### Title: exp2cell
> ### Aliases: exp2cell
>
> ### ** Examples
>
> #get breast cancer gene expression profile.
> exp.example<-GetExampleData("exp.example")
>
> #perform the exp2cell method. Method must be one of "xCell","ssGSEA" and "CIBERSORT".
> cellmatrix<-exp2cell(exp=exp.example,method="ssGSEA") #cell abundance matrix
Error: useNames = NA is defunct. Instead, specify either useNames = TRUE or useNames = FALSE.
Execution halted
Flavor: r-oldrel-windows-x86_64
Version: 0.1.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'SMDIC.Rmd' using rmarkdown
Quitting from lines 63-70 [unnamed-chunk-2] (SMDIC.Rmd)
Error: processing vignette 'SMDIC.Rmd' failed with diagnostics:
useNames = NA is defunct. Instead, specify either useNames = TRUE or useNames = FALSE.
--- failed re-building 'SMDIC.Rmd'
SUMMARY: processing the following file failed:
'SMDIC.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-x86_64