CRAN Package Check Results for Package OhdsiReportGenerator

Last updated on 2025-05-13 10:51:22 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.0 6.62 206.53 213.15 OK
r-devel-linux-x86_64-debian-gcc 1.1.0 4.34 152.64 156.98 OK
r-devel-linux-x86_64-fedora-clang 1.1.0 361.62 OK
r-devel-linux-x86_64-fedora-gcc 1.1.0 368.24 OK
r-devel-windows-x86_64 1.1.0 8.00 218.00 226.00 OK
r-patched-linux-x86_64 1.1.0 7.98 204.42 212.40 OK
r-release-linux-x86_64 1.1.0 5.14 202.45 207.59 OK
r-release-macos-arm64 1.1.0 34.00 ERROR
r-release-macos-x86_64 1.1.0 67.00 ERROR
r-release-windows-x86_64 1.1.0 9.00 216.00 225.00 OK
r-oldrel-macos-arm64 1.1.0 48.00 ERROR
r-oldrel-macos-x86_64 1.1.0 88.00 ERROR
r-oldrel-windows-x86_64 1.0.1 10.00 150.00 160.00 OK

Check Details

Version: 1.1.0
Check: tests
Result: ERROR Running ‘testthat.R’ [5s/4s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Backwards.R:11:3'): generatePresentationMultiple old works ───── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test-Backwards.R:11:3 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─OhdsiReportGenerator::generatePresentationMultiple(...) 7. └─OhdsiReportGenerator::generatePresentation(...) 8. └─quarto::quarto_render(...) 9. └─quarto:::find_quarto() 10. └─cli::cli_abort(quarto_not_found_msg) 11. └─rlang::abort(...) ── Error ('test-Generate.R:10:3'): generatePresentation ──────────────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentation(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) ── Error ('test-Generate.R:61:3'): generateFullReport ────────────────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generateFullReport(...) at test-Generate.R:61:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ] Error: Test failures Execution halted Closing database connection Flavor: r-release-macos-arm64

Version: 1.1.0
Check: tests
Result: ERROR Running ‘testthat.R’ [9s/7s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Backwards.R:11:3'): generatePresentationMultiple old works ───── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test-Backwards.R:11:3 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─OhdsiReportGenerator::generatePresentationMultiple(...) 7. └─OhdsiReportGenerator::generatePresentation(...) 8. └─quarto::quarto_render(...) 9. └─quarto:::find_quarto() 10. └─cli::cli_abort(quarto_not_found_msg) 11. └─rlang::abort(...) ── Error ('test-Generate.R:10:3'): generatePresentation ──────────────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentation(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) ── Error ('test-Generate.R:61:3'): generateFullReport ────────────────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generateFullReport(...) at test-Generate.R:61:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ] Error: Test failures Execution halted Closing database connection Flavor: r-release-macos-x86_64

Version: 1.1.0
Check: tests
Result: ERROR Running ‘testthat.R’ [6s/6s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Backwards.R:11:3'): generatePresentationMultiple old works ───── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test-Backwards.R:11:3 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─OhdsiReportGenerator::generatePresentationMultiple(...) 7. └─OhdsiReportGenerator::generatePresentation(...) 8. └─quarto::quarto_render(...) 9. └─quarto:::find_quarto() 10. └─cli::cli_abort(quarto_not_found_msg) 11. └─rlang::abort(...) ── Error ('test-Generate.R:10:3'): generatePresentation ──────────────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentation(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) ── Error ('test-Generate.R:61:3'): generateFullReport ────────────────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generateFullReport(...) at test-Generate.R:61:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ] Error: Test failures Execution halted Closing database connection Flavor: r-oldrel-macos-arm64

Version: 1.1.0
Check: tests
Result: ERROR Running ‘testthat.R’ [10s/11s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Backwards.R:11:3'): generatePresentationMultiple old works ───── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test-Backwards.R:11:3 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─OhdsiReportGenerator::generatePresentationMultiple(...) 7. └─OhdsiReportGenerator::generatePresentation(...) 8. └─quarto::quarto_render(...) 9. └─quarto:::find_quarto() 10. └─cli::cli_abort(quarto_not_found_msg) 11. └─rlang::abort(...) ── Error ('test-Generate.R:10:3'): generatePresentation ──────────────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentation(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) ── Error ('test-Generate.R:61:3'): generateFullReport ────────────────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generateFullReport(...) at test-Generate.R:61:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 3 | WARN 2 | SKIP 2 | PASS 417 ] Error: Test failures Execution halted Closing database connection Flavor: r-oldrel-macos-x86_64