Last updated on 2024-11-13 11:49:34 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.4.3 | 10.03 | 477.68 | 487.71 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.4.3 | 6.60 | 326.55 | 333.15 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.4.3 | 869.23 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.4.3 | 882.60 | ERROR | |||
| r-devel-windows-x86_64 | 0.4.3 | 12.00 | 619.00 | 631.00 | ERROR | |
| r-patched-linux-x86_64 | 0.4.3 | 11.63 | 470.60 | 482.23 | ERROR | |
| r-release-linux-x86_64 | 0.4.3 | 9.79 | 466.06 | 475.85 | ERROR | |
| r-release-macos-arm64 | 0.4.3 | 252.00 | OK | |||
| r-release-macos-x86_64 | 0.4.3 | 435.00 | OK | |||
| r-release-windows-x86_64 | 0.4.3 | 13.00 | 623.00 | 636.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.4.3 | 255.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.4.3 | 720.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.4.3 | 17.00 | 727.00 | 744.00 | ERROR |
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 23514 bytes
Input file size = 24396 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19733
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19714
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18288
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18206
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18206
Output IDAT size = 18206 bytes (5308 bytes decrease)
Output file size = 18284 bytes (6112 bytes = 25.05% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73897 bytes
Input file size = 74083 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68334
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66829
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66829
Output IDAT size = 66829 bytes (7068 bytes decrease)
Output file size = 66907 bytes (7176 bytes = 9.69% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84239 bytes
Input file size = 84437 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73020
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73020
Output IDAT size = 73020 bytes (11219 bytes decrease)
Output file size = 73098 bytes (11339 bytes = 13.43% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 62534 bytes
Input file size = 62696 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57064
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 56402
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 56402
Output IDAT size = 56402 bytes (6132 bytes decrease)
Output file size = 56480 bytes (6216 bytes = 9.91% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 50706 bytes
Input file size = 50856 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46723
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 46115
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 46115
Output IDAT size = 46115 bytes (4591 bytes decrease)
Output file size = 46193 bytes (4663 bytes = 9.17% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 59185 bytes
Input file size = 59347 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53274
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53274
Output IDAT size = 53274 bytes (5911 bytes decrease)
Output file size = 53352 bytes (5995 bytes = 10.10% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 117642 bytes
Input file size = 117888 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 97115
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 97115
Output IDAT size = 97115 bytes (20527 bytes decrease)
Output file size = 97193 bytes (20695 bytes = 17.55% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100264 bytes
Input file size = 100486 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85199
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85199
Output IDAT size = 85199 bytes (15065 bytes decrease)
Output file size = 85277 bytes (15209 bytes = 15.14% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 127290 bytes
Input file size = 127548 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103003
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103003
Output IDAT size = 103003 bytes (24287 bytes decrease)
Output file size = 103081 bytes (24467 bytes = 19.18% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46991 bytes
Input file size = 47129 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42939
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42939
Output IDAT size = 42939 bytes (4052 bytes decrease)
Output file size = 43017 bytes (4112 bytes = 8.72% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129038 bytes
Input file size = 129296 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99283
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99283
Output IDAT size = 99283 bytes (29755 bytes decrease)
Output file size = 99361 bytes (29935 bytes = 23.15% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 23809 bytes
Input file size = 24691 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19936
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 19925
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18422
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18329
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18329
Output IDAT size = 18329 bytes (5480 bytes decrease)
Output file size = 18407 bytes (6284 bytes = 25.45% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73708 bytes
Input file size = 73882 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68256
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66773
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66773
Output IDAT size = 66773 bytes (6935 bytes decrease)
Output file size = 66851 bytes (7031 bytes = 9.52% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84258 bytes
Input file size = 84456 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73328
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73328
Output IDAT size = 73328 bytes (10930 bytes decrease)
Output file size = 73406 bytes (11050 bytes = 13.08% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 59729 bytes
Input file size = 59891 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 55817
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 53882
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 53882
Output IDAT size = 53882 bytes (5847 bytes decrease)
Output file size = 53960 bytes (5931 bytes = 9.90% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 59502 bytes
Input file size = 59664 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53369
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53369
Output IDAT size = 53369 bytes (6133 bytes decrease)
Output file size = 53447 bytes (6217 bytes = 10.42% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60830 bytes
Input file size = 60992 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 54075
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 54075
Output IDAT size = 54075 bytes (6755 bytes decrease)
Output file size = 54153 bytes (6839 bytes = 11.21% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 115670 bytes
Input file size = 115916 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 96101
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 96101
Output IDAT size = 96101 bytes (19569 bytes decrease)
Output file size = 96179 bytes (19737 bytes = 17.03% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100204 bytes
Input file size = 100426 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85109
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85109
Output IDAT size = 85109 bytes (15095 bytes decrease)
Output file size = 85187 bytes (15239 bytes = 15.17% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 127624 bytes
Input file size = 127882 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103063
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103063
Output IDAT size = 103063 bytes (24561 bytes decrease)
Output file size = 103141 bytes (24741 bytes = 19.35% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46942 bytes
Input file size = 47080 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42773
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42773
Output IDAT size = 42773 bytes (4169 bytes decrease)
Output file size = 42851 bytes (4229 bytes = 8.98% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129054 bytes
Input file size = 129312 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99308
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99308
Output IDAT size = 99308 bytes (29746 bytes decrease)
Output file size = 99386 bytes (29926 bytes = 23.14% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 25928 bytes
Input file size = 26822 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21182
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 20345
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20208
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20208
Output IDAT size = 20208 bytes (5720 bytes decrease)
Output file size = 20286 bytes (6536 bytes = 24.37% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73874 bytes
Input file size = 74060 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68407
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66840
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66840
Output IDAT size = 66840 bytes (7034 bytes decrease)
Output file size = 66918 bytes (7142 bytes = 9.64% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 85028 bytes
Input file size = 85226 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73341
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73341
Output IDAT size = 73341 bytes (11687 bytes decrease)
Output file size = 73419 bytes (11807 bytes = 13.85% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60893 bytes
Input file size = 61055 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56634
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55026
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55026
Output IDAT size = 55026 bytes (5867 bytes decrease)
Output file size = 55104 bytes (5951 bytes = 9.75% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 65495 bytes
Input file size = 65657 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56902
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56902
Output IDAT size = 56902 bytes (8593 bytes decrease)
Output file size = 56980 bytes (8677 bytes = 13.22% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60006 bytes
Input file size = 60168 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53571
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53571
Output IDAT size = 53571 bytes (6435 bytes decrease)
Output file size = 53649 bytes (6519 bytes = 10.83% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 117387 bytes
Input file size = 117633 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 97380
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 97380
Output IDAT size = 97380 bytes (20007 bytes decrease)
Output file size = 97458 bytes (20175 bytes = 17.15% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100808 bytes
Input file size = 101030 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85853
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85853
Output IDAT size = 85853 bytes (14955 bytes decrease)
Output file size = 85931 bytes (15099 bytes = 14.95% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 128436 bytes
Input file size = 128694 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104251
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104251
Output IDAT size = 104251 bytes (24185 bytes decrease)
Output file size = 104329 bytes (24365 bytes = 18.93% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46828 bytes
Input file size = 46966 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42863
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42863
Output IDAT size = 42863 bytes (3965 bytes decrease)
Output file size = 42941 bytes (4025 bytes = 8.57% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129055 bytes
Input file size = 129313 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99234
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99234
Output IDAT size = 99234 bytes (29821 bytes decrease)
Output file size = 99312 bytes (30001 bytes = 23.20% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 24189 bytes
Input file size = 25071 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20295
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20284
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 19105
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 19051
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 19051
Output IDAT size = 19051 bytes (5138 bytes decrease)
Output file size = 19129 bytes (5942 bytes = 23.70% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73700 bytes
Input file size = 73874 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68245
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66685
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66685
Output IDAT size = 66685 bytes (7015 bytes decrease)
Output file size = 66763 bytes (7111 bytes = 9.63% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 82435 bytes
Input file size = 82633 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71981
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71981
Output IDAT size = 71981 bytes (10454 bytes decrease)
Output file size = 72059 bytes (10574 bytes = 12.80% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61505 bytes
Input file size = 61667 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56514
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55573
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55573
Output IDAT size = 55573 bytes (5932 bytes decrease)
Output file size = 55651 bytes (6016 bytes = 9.76% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 65670 bytes
Input file size = 65844 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56865
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56865
Output IDAT size = 56865 bytes (8805 bytes decrease)
Output file size = 56943 bytes (8901 bytes = 13.52% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 59684 bytes
Input file size = 59846 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53323
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53323
Output IDAT size = 53323 bytes (6361 bytes decrease)
Output file size = 53401 bytes (6445 bytes = 10.77% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 115404 bytes
Input file size = 115650 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95324
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95324
Output IDAT size = 95324 bytes (20080 bytes decrease)
Output file size = 95402 bytes (20248 bytes = 17.51% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100494 bytes
Input file size = 100716 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85671
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85671
Output IDAT size = 85671 bytes (14823 bytes decrease)
Output file size = 85749 bytes (14967 bytes = 14.86% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 128605 bytes
Input file size = 128863 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104245
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104245
Output IDAT size = 104245 bytes (24360 bytes decrease)
Output file size = 104323 bytes (24540 bytes = 19.04% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46811 bytes
Input file size = 46949 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42883
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42883
Output IDAT size = 42883 bytes (3928 bytes decrease)
Output file size = 42961 bytes (3988 bytes = 8.49% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129193 bytes
Input file size = 129451 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99255
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99255
Output IDAT size = 99255 bytes (29938 bytes decrease)
Output file size = 99333 bytes (30118 bytes = 23.27% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'consistencychecking-3.Rmd' using rmarkdown
--- finished re-building 'consistencychecking-3.Rmd'
--- re-building 'dataexploration-1.Rmd' using rmarkdown
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building 'dataexploration-1.Rmd'
--- re-building 'mbnmadose-overview.Rmd' using rmarkdown
--- finished re-building 'mbnmadose-overview.Rmd'
--- re-building 'metaregression-6.Rmd' using rmarkdown
--- finished re-building 'metaregression-6.Rmd'
--- re-building 'nma_in_mbnmadose.Rmd' using rmarkdown
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building 'nma_in_mbnmadose.Rmd'
--- re-building 'outputs-4.Rmd' using rmarkdown
--- finished re-building 'outputs-4.Rmd'
--- re-building 'predictions-5.Rmd' using rmarkdown
--- finished re-building 'predictions-5.Rmd'
--- re-building 'runmbnmadose-2.Rmd' using rmarkdown
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building 'runmbnmadose-2.Rmd'
SUMMARY: processing the following files failed:
'dataexploration-1.Rmd' 'nma_in_mbnmadose.Rmd' 'runmbnmadose-2.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 24886 bytes
Input file size = 25780 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21120
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 20393
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20279
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20279
Output IDAT size = 20279 bytes (4607 bytes decrease)
Output file size = 20357 bytes (5423 bytes = 21.04% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73754 bytes
Input file size = 73940 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68112
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66668
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66668
Output IDAT size = 66668 bytes (7086 bytes decrease)
Output file size = 66746 bytes (7194 bytes = 9.73% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 82424 bytes
Input file size = 82622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71851
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71851
Output IDAT size = 71851 bytes (10573 bytes decrease)
Output file size = 71929 bytes (10693 bytes = 12.94% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 63388 bytes
Input file size = 63550 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58173
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 57077
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 57077
Output IDAT size = 57077 bytes (6311 bytes decrease)
Output file size = 57155 bytes (6395 bytes = 10.06% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 54976 bytes
Input file size = 55126 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 50253
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 50113
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 50113
Output IDAT size = 50113 bytes (4863 bytes decrease)
Output file size = 50191 bytes (4935 bytes = 8.95% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 50886 bytes
Input file size = 51036 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46887
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 46265
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 46265
Output IDAT size = 46265 bytes (4621 bytes decrease)
Output file size = 46343 bytes (4693 bytes = 9.20% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 116164 bytes
Input file size = 116410 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95877
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95877
Output IDAT size = 95877 bytes (20287 bytes decrease)
Output file size = 95955 bytes (20455 bytes = 17.57% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100988 bytes
Input file size = 101210 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 86086
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 86086
Output IDAT size = 86086 bytes (14902 bytes decrease)
Output file size = 86164 bytes (15046 bytes = 14.87% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 128881 bytes
Input file size = 129139 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104430
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104430
Output IDAT size = 104430 bytes (24451 bytes decrease)
Output file size = 104508 bytes (24631 bytes = 19.07% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46282 bytes
Input file size = 46420 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42367
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42367
Output IDAT size = 42367 bytes (3915 bytes decrease)
Output file size = 42445 bytes (3975 bytes = 8.56% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129119 bytes
Input file size = 129377 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99259
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99259
Output IDAT size = 99259 bytes (29860 bytes decrease)
Output file size = 99337 bytes (30040 bytes = 23.22% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 23534 bytes
Input file size = 24416 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20020
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20004
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18659
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18597
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18597
Output IDAT size = 18597 bytes (4937 bytes decrease)
Output file size = 18675 bytes (5741 bytes = 23.51% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73827 bytes
Input file size = 74013 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68262
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66800
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66800
Output IDAT size = 66800 bytes (7027 bytes decrease)
Output file size = 66878 bytes (7135 bytes = 9.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84241 bytes
Input file size = 84439 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73150
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73150
Output IDAT size = 73150 bytes (11091 bytes decrease)
Output file size = 73228 bytes (11211 bytes = 13.28% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61048 bytes
Input file size = 61210 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56444
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55156
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55156
Output IDAT size = 55156 bytes (5892 bytes decrease)
Output file size = 55234 bytes (5976 bytes = 9.76% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60512 bytes
Input file size = 60674 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53589
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53589
Output IDAT size = 53589 bytes (6923 bytes decrease)
Output file size = 53667 bytes (7007 bytes = 11.55% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 65918 bytes
Input file size = 66092 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57439
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57439
Output IDAT size = 57439 bytes (8479 bytes decrease)
Output file size = 57517 bytes (8575 bytes = 12.97% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 115530 bytes
Input file size = 115776 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95750
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95750
Output IDAT size = 95750 bytes (19780 bytes decrease)
Output file size = 95828 bytes (19948 bytes = 17.23% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 99914 bytes
Input file size = 100136 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 84917
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 84917
Output IDAT size = 84917 bytes (14997 bytes decrease)
Output file size = 84995 bytes (15141 bytes = 15.12% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 128096 bytes
Input file size = 128354 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103417
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103417
Output IDAT size = 103417 bytes (24679 bytes decrease)
Output file size = 103495 bytes (24859 bytes = 19.37% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46993 bytes
Input file size = 47131 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42863
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42863
Output IDAT size = 42863 bytes (4130 bytes decrease)
Output file size = 42941 bytes (4190 bytes = 8.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129168 bytes
Input file size = 129426 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99221
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99221
Output IDAT size = 99221 bytes (29947 bytes decrease)
Output file size = 99299 bytes (30127 bytes = 23.28% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-linux-x86_64