rlang, Seurat, ggplot2, tidyr, dplyr, colorspace, viridis,
pbapply, patchwork, Nebulosa, ggbeeswarm, scales, stringr,
Matrix (>= 1.3.3), rmarkdown, knitr, purrr, testthat (>=
3.0.0), SeuratObject, qpdf, covr, circlize, ComplexHeatmap,
ggrepel, forcats, svglite, ggrastr, ggtext, pheatmap, ggExtra,
ggplotify, scattermore, ggdist, tibble, plyr, graphics,
magrittr, ggridges, ggsignif, infercnv, rjags, rgdal,
assertthat
Seurat, ggplot2, patchwork, dplyr, tidyr, tibble, magrittr,
stringr, assertthat, viridis, circlize, colorspace,
ComplexHeatmap, ggbeeswarm, ggdist, ggExtra, ggplotify,
ggrastr, ggrepel, ggridges, ggsignif, graphics, Nebulosa,
pheatmap, plyr, rlang, scales, scattermore, covr, forcats,
infercnv, knitr, Matrix, purrr, qpdf, rgdal, rjags, rmarkdown,
svglite, testthat (>= 3.0.0)
assertthat, circlize, colorspace, covr, ComplexHeatmap,
dplyr, ggbeeswarm, ggdist, ggExtra, ggplot2, ggplotify,
ggrastr, ggrepel, ggridges, ggsignif, graphics, magrittr,
Nebulosa, patchwork, pheatmap, plyr, rlang, scales,
scattermore, Seurat, tibble, tidyr, forcats, infercnv, knitr,
Matrix, purrr, qpdf, rgdal, rjags, rmarkdown, stringr, svglite,
ggalluvial, testthat (>= 3.0.0), viridis
assertthat, circlize, colorspace, covr, ComplexHeatmap,
dplyr, ggbeeswarm, ggdist, ggExtra, ggplot2, ggplotify,
ggrastr, ggrepel, ggridges, ggsignif, graphics, magrittr,
Nebulosa, patchwork, pheatmap, plyr, rlang, scales,
scattermore, Seurat, tibble, tidyr, forcats, infercnv, knitr,
Matrix, purrr, qpdf, rgdal, rjags, rmarkdown, stringr, svglite,
ggalluvial, testthat (>= 3.0.0), viridis, UCell (>= 2.0)
assertthat, circlize, colorspace, covr, ComplexHeatmap,
dplyr, ggbeeswarm, ggdist, ggExtra, ggplot2 (>= 3.4.0),
ggplotify, ggrastr, ggrepel, ggridges, ggsignif, graphics,
magrittr, Nebulosa, patchwork, pheatmap, plyr, rlang, scales,
scattermore, Seurat, tibble, tidyr, forcats, infercnv, knitr,
Matrix, purrr, qpdf, rgdal, rjags, rmarkdown, stringr, svglite,
ggalluvial, testthat (>= 3.0.0), viridis, UCell, AUCell,
clusterProfiler, enrichplot, ggnewscale, AnnotationDbi,
org.Hs.eg.db
AnnotationDbi, assertthat, AUCell, circlize, cli, cluster,
clusterProfiler, colorspace, ComplexHeatmap, covr, decoupleR,
dplyr (>= 1.1.0), enrichplot, forcats, ggalluvial, ggbeeswarm,
ggdist, ggExtra, ggh4x, ggnewscale, ggplot2 (>= 3.4.0),
ggplotify, ggrastr, ggrepel, ggridges, ggsignif, graphics,
infercnv, knitr, labeling, magrittr, MASS, Matrix, methods,
Nebulosa, org.Hs.eg.db, patchwork, pheatmap, plyr, purrr, qpdf,
RColorBrewer, rgdal, rjags, rlang, rmarkdown, scales,
scattermore, Seurat, SeuratObject, stringr, svglite, testthat
(>= 3.0.0), tibble, tidyr, UCell, viridis, withr
AnnotationDbi, assertthat, AUCell, circlize, cli, cluster,
clusterProfiler, colorspace, ComplexHeatmap, covr, decoupleR,
dplyr (>= 1.1.0), enrichplot, forcats, ggalluvial, ggbeeswarm,
ggdist, ggExtra, ggh4x, ggnewscale, ggplot2 (>= 3.4.0),
ggplotify, ggrastr, ggrepel, ggridges, ggsignif, graphics,
infercnv, knitr, labeling, magrittr, MASS, Matrix, methods,
Nebulosa, org.Hs.eg.db, patchwork, pheatmap, plyr, purrr, qpdf,
RColorBrewer, rjags, rlang, rmarkdown, scales, scattermore,
Seurat, SeuratObject, sf, stringr, svglite, testthat (>=
3.0.0), tibble, tidyr, UCell, viridis, withr
assertthat, circlize, cli, cluster, colorspace,
ComplexHeatmap, covr, decoupleR, dplyr (>= 1.1.0), enrichplot,
forcats, ggalluvial (>= 0.12.5), ggbeeswarm, ggdist, ggExtra,
ggh4x, ggplot2 (>= 3.4.0), ggplotify, ggrastr, ggrepel,
ggridges, ggsignif, graphics, infercnv, KernSmooth, knitr,
labeling, magrittr, MASS, Matrix, methods, Nebulosa,
org.Hs.eg.db, patchwork, pheatmap, plyr, purrr, qpdf,
RColorBrewer, rjags, rlang, rmarkdown, scales, scattermore,
Seurat, SeuratObject, sf, stringr, svglite, testthat (>=
3.0.0), tibble, tidyr, UCell, viridis, waffle, withr