46034558dd89885f49bf7a74e25933d1 *DESCRIPTION
488d2bdb7fdab77b4e640dacbbfbfc7f *NAMESPACE
3e7bc054840bf539400200f516ab3b79 *R/data.R
92e2cdde34e79d7438168833778824af *R/fitode-class.R
f56d0a747e65937eabb0b7792258d32d *R/fitode-methods.R
e8a054f25cc17a47f44d782325fed440 *R/fitode.R
0c8545348f059f2b5162973c6b8e7364 *R/fitodeMCMC-methods.R
14a53ef4ee914f512088d7d91594371c *R/fitodeMCMC.R
423c01c978f030970b5e164e8b5cca63 *R/generic.R
11999edca84c4004e50fc4c225191d4b *R/loglik.R
27a51354f2feada79c5b5c4198fc7842 *R/model.R
175cc36b42271b0ae0a9455de22c450a *R/plot.R
873f4bd38fcac1712e8d0ed4082440de *R/prior.R
4863594bd7ee320f5e58198a4d4fa261 *R/simulate.R
ae86f47e7ec2d0d3555249e672bb1519 *R/solution.R
f92fe0527569fc2843132b39d22cd8cd *R/transform.R
1d51deb04395e0c9dcdf51ce19a0dc13 *R/update.R
13403b4a3e2c5fd1f165c041b5e11c3a *R/utilities.R
a41e1f9c7382ae99575ece35e72181fd *R/wmvrnorm.R
a987634c2f511dbc379a01160cb24de3 *R/zzz.R
69a5a0e99b585e09e183a0cc58a6f3ff *README.md
2ae7af4d2918e6265431e481283fd407 *build/vignette.rds
88acc6e70cefae4a2c539e9447ff5b35 *data/SierraLeone2014.rda
a9681432ec3c9ddd647c97602b4a04ff *data/blowfly97I.rda
7ca7a3d167b8009481888e530f52ccb0 *data/tumorgrowth.rda
af0461a7eb8dd75ce7c608e9be4c7c57 *inst/doc/fitode.R
5efef154274c98ad91b9b0ade81996f3 *inst/doc/fitode.Rnw
5459e50eed8d6a6a5ad3ecc7457d9a0d *inst/doc/fitode.pdf
eceb77b6df811aa0e71ddb1560ec236e *man/Eval-loglik.ode-method.Rd
9a2ed4be84abb5929fa7da3d77a9d1bd *man/Eval.Rd
c37cbdd4f10d372bad97aa029536a1df *man/SierraLeone2014.Rd
8237714fe97ee4ae3e08c10f77a4a6a4 *man/Transform-loglik.ode-method.Rd
1d3acc658aa15d4e43a4356a7394a1dc *man/Transform-odemodel-method.Rd
3d272e9b6280ece750282538a9cfce73 *man/Transform-prior.ode-method.Rd
a204258147dc3a05084ec6c996c7949c *man/Transform.Rd
badb47649829a35fb15684847068a67f *man/apply_link.Rd
33be9d032d6a059b6569e9c3c3627ba5 *man/blowfly.Rd
3dbe1d0eb2a9b567d51db7ecd101e9dd *man/check_link.Rd
b48752e398baa36e6aa873ad266ce1a5 *man/coef-fitode-method.Rd
d808a33f86a072be875d5dd1be988c74 *man/coef-fitodeMCMC-method.Rd
f4d085ace7de6839b67647cb0fd04b29 *man/confint-fitode-method.Rd
2156990a52c3729af0895d83575ec425 *man/confint-fitodeMCMC-method.Rd
6e7c3e295ce985746e114552e36060d7 *man/dfun.Rd
43df2b02d0e25fcb24dbdf24455148b5 *man/dfun2.Rd
26ee03ddcd2be4459bca965c03b41b1e *man/fitode-class.Rd
1c926540f8e2bee63bc7badca6cf2cf9 *man/fitode.Rd
cecc357c732b567c5a0220421dcae1e7 *man/fitodeMCMC-class.Rd
db0f0174083275b7b3f6a0cfd5299bae *man/fitodeMCMC.Rd
fd32e4e8fb67ee7f2c3f5fdeaca9c4cf *man/fixpar.Rd
d669b5d93f3b893f2eb045fadfea73e4 *man/grad-loglik.ode-method.Rd
3325f9d71a18931a6b83a83cbbf2d780 *man/grad-odemodel-method.Rd
e5e1087643584eb75f3f3b3ac43018c0 *man/grad.Rd
76c956630e3e6619f76bece3c654e378 *man/hessian.Rd
dff1fd256f55fb831fee0cb7bee07036 *man/initialize-loglik.ode-method.Rd
5832f3ea523a7ae1cefbbe9c709acb2d *man/initialize-odemodel-method.Rd
8e8e84c84f821c453b76354446e77af5 *man/initialize-prior.ode-method.Rd
a9deacee71a6ae8474cd5ad86c6337ed *man/initialize-solution.ode-method.Rd
69dd12c81a030cb52b800eb1079a4505 *man/jacobian-odemodel-method.Rd
0ef2203143f928ff485b15081b201c7a *man/jacobian.Rd
fc363d6c446975a22ac75b35f45fe68b *man/logLik-fitode-method.Rd
9d58b7666b9263db5192eaa1f704ef02 *man/logLik.sensitivity.Rd
9b24a3f895bcfc8b1432caf27b17ee8f *man/loglik.ode-class.Rd
cae3b8ecf7fecf66093f7c5387f08b30 *man/make_prior.Rd
516e6fc8098c902f78bfa394763b3ccc *man/ode.sensitivity.Rd
95d1cae6ebd3a7cf4f9cd97b5d9ab0a1 *man/ode.solve.Rd
1b7e29fa7b2bb63f14083158f0dab5fe *man/odemodel-class.Rd
3d3623a2fde1ff0c605ccc8b39538092 *man/plot-fitode-missing-method.Rd
348bbfa60fa171996b7d18c33ef6132e *man/plot-fitodeMCMC-missing-method.Rd
6e4af2c6a727790648cbb86f31f9886b *man/plot_internal.Rd
224a991bfc8db2bd4d38ac286341c56c *man/predict-fitode-method.Rd
e0eeb878d9aae1ae53a7ce911a36cdef *man/predict-fitodeMCMC-method.Rd
4693ab514b856fd0d4033a77c3c651aa *man/prior.ode-class.Rd
628957d46f21b6ee69c13fb6e9226b45 *man/profile-fitode-method.Rd
4475da100cbed50667cbac4535fb688b *man/select_model.Rd
266a0fa2d328e76e2ca233133bc7c1cd *man/select_prior.Rd
b2583132b3811e8851c993bc136bbc15 *man/set_link.Rd
61935e45a76d27aa5e170332a32ee3e3 *man/show-fitode-method.Rd
f89791505ce455c3ab5ed2cd839b8cd8 *man/show-fitodeMCMC-method.Rd
f1390a64191211ab8246fd9d57adc486 *man/show-odemodel-method.Rd
ecbd085bb5796eb3c22543aedd5ddaf0 *man/simulate-fitode-method.Rd
1919504945ea7088ee04627ef33eb194 *man/simulate-odemodel-method.Rd
a1ca78cd54b5aede70233100c8902d74 *man/simulate_internal.Rd
d52dc075ed02af9af2fa064a9429b60e *man/solution.de-class.Rd
10e2b86910d188298acff66ecd4dbf5a *man/stdEr-fitode-method.Rd
381db35989ff59415849b3acc4788c64 *man/stdEr-fitodeMCMC-method.Rd
b7f6935c4b8aafd964c253a8790e100d *man/summary-fitode-method.Rd
9f9089e7211ac338f9663bd24b69cd82 *man/summary-fitodeMCMC-method.Rd
26e7972e96097cfbcb817d13d9fc3df1 *man/tumorgrowth.Rd
688c9be5eab07a4c9e8a3e930a08ebff *man/update-fitode-method.Rd
5c67a1749cbd0373c554da3485afa01c *man/update-fitodeMCMC-method.Rd
bf9302934f32cfa7650fafbbf9bf5259 *man/vcov-fitode-method.Rd
50a3a1f00deafabb8acda020cee717ab *man/vcov-fitodeMCMC-method.Rd
681843e383f44876a46992149aced54c *tests/testthat.R
78294fdd57f39f6f5c1e40f3a5c503bd *tests/testthat/test-logLik.R
8832ed3a2c7971fecadb3e1e1cd72e89 *tests/testthat/test-methods.R
9902fedd27f625c87d597661275c58f3 *tests/testthat/test-ols.R
188f7543c388295d72b899452889c658 *tests/testthat/test-prior.R
cda09280398cd67d7ac3871035663cd6 *tests/testthat/test-sensitivity.R
0724944f100a2a4c9073dd579c3a7c86 *tests/testthat/test-sensitivityLik.R
b50560404e59ac81b7bc6ed567603b67 *vignettes/fitode-ms.synctex.gz
5efef154274c98ad91b9b0ade81996f3 *vignettes/fitode.Rnw
4d72a22ff4556aa9fe8a90806d7e2e7c *vignettes/fitode.bib
