c089e95f8bb796fecf9a820005807cbc *DESCRIPTION
ac4d29631708b0a1f02384a04572cb05 *NAMESPACE
ce5e1d18537d283c775d05db663d1f7e *R/accessors.R
8cd3be9bb2b4f3255a01234e5838dcf7 *R/add.gaps.R
0571eb4d2efb6c6fb194763d6747e974 *R/concatenate.R
03a3f74a056bb6892801cdc1b861a362 *R/datasets.R
e914470e4a596b3ea965a232e22dcd26 *R/dist.R
d02f8a37ac063036ca9a2c9acec69476 *R/doc.R
642fc2b1a2843aece4ef8d99b0171927 *R/exports.R
b80a27b5831f4e2594d5db38e4d480f2 *R/getTree.R
306858ab6031bb3c5c744869a916a8a7 *R/internal.R
59ff39655b8dff0678bf46fbd7428d6f *R/multidna.class.R
286d32365319e5d57b624384190f7728 *R/multidna.constructor.R
49208445e99af271bc50e5217d9abc89 *R/multiphyDat.class.R
0cb79ed222e1e390af3274420eee4e5f *R/multiphyDat.constructor.R
fc3d34dc98511d608fca650d1bf727d2 *R/plot.R
665492dac7865e036f2ea77e469ae811 *R/readfiles.R
7a963df75888f19ee8a8af40f3210ac2 *R/rm.gaps.R
097f41dbd74d9e053dfc2be4b0cec453 *R/show.R
a30cbca426ca954739d26ac7c2f7afd3 *R/subset.R
0f368ca8c1e87037313abcae2865d3a5 *README.md
234acd12ac3c648b53697143925cda1d *build/vignette.rds
3650949e39f99224ae1ae50ee14f2c78 *inst/doc/apex.R
58e128566bcd4b9963c313b5ea504b9f *inst/doc/apex.Rmd
2fcff9bf1489d27a1431448fdb53caef *inst/doc/apex.html
9153e1e71df1d0ffdaee7e69f291b93b *inst/patr_poat43.fasta
49ae6851973377bde9287e1f12e17039 *inst/patr_poat47.fasta
80b8bdab91a3bd769896fb921d670562 *inst/patr_poat48.fasta
b261f01a6b74f7ef51f605faac4fd68f *inst/patr_poat49.fasta
5348cc813140cbea9ccdd9f826032dce *man/accessors.Rd
9556630c3499ebf9b3804fd7695f2da0 *man/add.gaps.Rd
fcf55cfb87613208727b85c17b283d56 *man/apex.Rd
b8613cde784141e63e9a576c0d1f0e69 *man/concatenate.Rd
769711a2d54003415e773528f21b12d0 *man/dist.multidna.Rd
b2f4f936c496a1af57e8d0b59ab892c5 *man/getTree.Rd
ae99d9a2e0f27cf2717de28bf84793b8 *man/initialize-multidna-method.Rd
bfd13214ea1c94eb595014b2ac0b93b7 *man/initialize-multiphyDat-method.Rd
95d13f2bf4de38ba8574857143ac35f7 *man/multidna.Rd
a62a9847fc377c3731f3333470f93337 *man/multidna2alignment.Rd
5afe07132ce612efa7cbfb8690319fb6 *man/multidna2genind.Rd
721359378ef28d6a1de28d803e6cc461 *man/multidna2multiphyDat.Rd
fd082985f69af7a09c57081f1b186727 *man/multiphyDat.Rd
ddd8a04dc82bd6d95e4b407d69e9c03a *man/plot-multidna-ANY-method.Rd
a81c5eb54613f1ba5f5f494bf24825aa *man/readfiles.Rd
80ae0eeebcbec883c86e08790d886910 *man/rm.gaps.Rd
e443cd750012e43ecae5a25ec12a66e2 *man/show-multidna-method.Rd
5dbd4245b12456e64cf9c85931837232 *man/show-multiphyDat-method.Rd
b4192c4918654aa22da24afff38b461b *man/subset.multidna.Rd
77cae94d75d005e65dc4860894d61e2a *tests/testthat.R
0729339aeed636286b479f53621bcef7 *tests/testthat/test_export.R
7d88456710096b92a1ba9201b558ef29 *vignettes/apex.Rmd
60366a8e9bc243ce0c12a97cc5ef4b48 *vignettes/figs/class-1.png
669d294dfaf97fcdd4f72ef44c2aa67d *vignettes/figs/class-2.png
8644474f471d7293d96a31dd88722436 *vignettes/figs/concat-1.png
20fa082a287c06a3590fc07a6228ae8a *vignettes/figs/concat-2.png
f764cd3bf6ad1aa1548bb46abd32ae0d *vignettes/figs/handling-1.png
0fbe601c6594cceb0058ee8e6ca79f11 *vignettes/figs/handling-2.png
54b45e1b2ead0e0bed86858708abdba7 *vignettes/figs/plotMultiPhylo-1.png
a15db782ffe1ef99363415f9bc4e0812 *vignettes/figs/plotPhyloSingle-1.png
3cd46e6ea91cfdc35286428e6e0245ba *vignettes/figs/plotPmlPart-1.png
f764cd3bf6ad1aa1548bb46abd32ae0d *vignettes/figs/readfiles-1.png
