* using log directory 'd:/Rcompile/CRANpkg/local/4.5/switchr.Rcheck' * using R Under development (unstable) (2024-11-07 r87302 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'switchr/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'switchr' version '0.14.8' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'switchr' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking whether startup messages can be suppressed ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [2s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [5s] ERROR Running 'winpath.R' [5s] Running the tests in 'tests/winpath.R' failed. Complete output: > library(switchr) > ## if(getOption("repos")["CRAN"] == "@CRAN@") > ## chooseCRANmirror(ind=1L) > graceful_inet(TRUE) $on [1] TRUE $silent [1] FALSE > checkUrlRoundtrip = function(pth) { + pth = switchr:::normalizePath2(pth) + furl = switchr:::makeFileURL(pth) + pth2 = switchr:::fileFromFileURL(furl) + if(pth != pth2) + stop("Round trip result (", pth2, ") does not match original (", pth, ") when creating file URLs") + } > > ## regression test to ensure that the roundtrip > ## between path and file url is working properly > checkUrlRoundtrip(getwd()) > checkUrlRoundtrip(tempdir()) > if(switchr:::isWindows()) + checkUrlRoundtrip("\\\\localhost\\c$") > > ## regreossion test to ensure that package dependencies > ## are added to the dontunload list when a package > ## is specified > bef = switchrDontUnload() > af = switchrDontUnload("knitr") > stopifnot(all(tools::package_dependencies("knitr", recursive = TRUE)[[1]] %in% af)) > > > ## regression test for unnecessary (and expensive) > ## lazy repo construction when install_packages > ## is passed urls for existing repos (the default > ## behavior). > tmplib = tempdir() > trace(lazyRepo, stop) Tracing function "lazyRepo" in environment Warning: Tracing only in the namespace; to untrace you will need: untrace("lazyRepo", where = getNamespace("switchr")) [1] "lazyRepo" attr(,"package") [1] "switchr" > install_packages("switchr", repos = defaultRepos(), lib = tmplib) Error in FUN(X[[i]], ...) : Unidentifiable string:https://bioconductor.org/packages/3.21/data/annotation Calls: install_packages ... install_packages -> getStringType -> unique -> sapply -> lapply -> FUN Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [19s] OK * checking PDF version of manual ... [24s] OK * checking HTML version of manual ... [12s] OK * DONE Status: 1 ERROR