* using log directory 'd:/Rcompile/CRANpkg/local/4.5/EHR.Rcheck'
* using R Under development (unstable) (2024-11-07 r87302 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'EHR/DESCRIPTION' ... OK
* this is package 'EHR' version '0.4-11'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'EHR' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s] OK
* checking whether the package can be unloaded cleanly ... [1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s] OK
* checking loading without being on the library search path ... [1s] OK
* checking whether startup messages can be suppressed ... [1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [13s] OK
* checking Rd files ... [1s] NOTE
checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckData}
       |     ^
checkRd: (-1) mod-internal.Rd:34: Lost braces
    34 | code{processErx}: prepare e-prescription data
       |     ^
checkRd: (-1) mod-internal.Rd:36: Lost braces
    36 | code{processErxAddl}: additional processing, checking for connected observations
       |     ^
checkRd: (-1) mod-internal.Rd:38: Lost braces
    38 | code{validateColumns}: check columns are in place
       |     ^
checkRd: (-1) mod-internal.Rd:40: Lost braces
    40 | code{read}: generic read function
       |     ^
checkRd: (-1) mod-internal.Rd:42: Lost braces
    42 | code{setDoseMar}: set unit/rate/date columns
       |     ^
checkRd: (-1) pk-internal.Rd:19: Lost braces
    19 | code{takeClosest}: take value at nearest time
       |     ^
checkRd: (-1) pk-internal.Rd:22: Lost braces
    22 | code{takeClosestTime}: find nearest time
       |     ^
checkRd: (-1) pk-internal.Rd:24: Lost braces
    24 | code{daysDiff}: number of days between two dates
       |     ^
checkRd: (-1) pk-internal.Rd:26: Lost braces
    26 | code{minDiff}: difference (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [2s] OK
* checking data for ASCII and uncompressed saves ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [24s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [205s] OK
* checking PDF version of manual ... [29s] OK
* checking HTML version of manual ... [9s] OK
* DONE
Status: 1 NOTE